Pre_GI: BLASTP Hits

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Query: NC_005126:4333767:4385662 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4385662, End: 4386354, Length: 693

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:3568046:357273735727373573423687Photorhabdus asymbiotica, complete genomehypothetical protein1e-97355
NC_012962:3568046:357344935734493574117669Photorhabdus asymbiotica, complete genomehypothetical protein7e-76283
NC_008800:36500:451474514745833687Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LuxR family transcription regulatory protein5e-43174
NC_012962:3568046:357200835720083572697690Photorhabdus asymbiotica, complete genomesimilar to transcription regulator LuxR family7e-43173
NC_008800:36500:472944729447980687Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LuxR family transcription regulatory protein5e-41167
NC_015224:2473582:247662024766202477336717Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LuxR family transcriptional regulatory protein2e-40166
NC_008800:36500:458634586346549687Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LuxR family transcription regulatory protein3e-40165
NC_008800:36500:465794657947265687Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LuxR family transcription regulatory protein8e-40163
NC_008800:36500:444314443145117687Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LuxR family transcription regulatory protein3e-38158
NC_015224:2701914:272219427221942722895702Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LuxR family transcriptional regulatory protein2e-37155
NC_008800:2127918:213562721356272136328702Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LuxR family transcriptional regulatory protein3e-37155
NC_014838:175939:189957189957190676720Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, LuxR family3e-37154
NC_020211:4484817:449841344984134499102690Serratia marcescens WW4, complete genomeLuxR family transcriptional regulator1e-35149
NC_008800:575141:584895584895585584690Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative transcriptional regulator1e-34146
NC_015224:610807:617284617284617973690Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative transcriptional regulator3e-34145
NC_012880:3748665:375513537551353755824690Dickeya dadantii Ech703, complete genometranscriptional regulator, LuxR family5e-33140
NC_014841:248487:267581267581268264684Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetranscriptional regulator, LuxR family1e-31136
NC_008800:2127918:213790921379092138673765Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LuxR family transcriptional regulatory protein3e-31135
NC_007712:1954808:196454619645461965259714Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-28125
NC_007712:1219957:123375212337521234444693Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-23108
NC_007712:1954808:197539919753991976067669Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-22105
NC_007712:2897000:290557529055752906039465Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-1995.1
NC_012752:1:231123112982672Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidputative transcriptional regulator, PAS domain protein4e-1891.3
NC_012751:1988280:201174720117472012094348Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative transcriptional regulator, GerE domain protein6e-1271.2
NC_007712:3511500:352242935224293522908480Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein6e-1271.2
NC_014841:248487:268269268269268916648Pantoea sp. At-9b plasmid pPAT9B04, complete sequencePAS fold-4 domain protein5e-1167.8