Pre_GI: BLASTP Hits

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Query: NC_005126:2063667:2081920 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 2081920, End: 2083536, Length: 1617

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008750:807446:8147688147688163781611Shewanella sp. W3-18-1, complete genometransposase, IS4 family0728
NC_008750:807446:8245628245628261721611Shewanella sp. W3-18-1, complete genometransposase, IS4 family0728
NC_008577:2604281:2631322263132226329351614Shewanella sp. ANA-3 chromosome 1, complete sequencetransposase, IS4 family3e-172605
NC_009464:379377:3944513944513960431593Uncultured methanogenic archaeon RC-I, complete genometransposase (IS4)2e-92340
NC_005125:2393701:2410405241040524120391635Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-91336
NC_005835:259702:2612542612542628821629Thermus thermophilus HB27, complete genometransposase3e-91336
NC_005835:1773482:1787738178773817893661629Thermus thermophilus HB27, complete genometransposase2e-90333
NC_003552:1259356:1268370126837012699981629Methanosarcina acetivorans C2A, complete genometransposase6e-86318
NC_008553:1267580:1278035127803512796391605Methanosaeta thermophila PT, complete genometransposase9e-86318
NC_008553:1717000:1734928173492817365321605Methanosaeta thermophila PT, complete genometransposase9e-86318
NC_015416:2374000:2375340237534023769531614Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein7e-85315
NC_003552:1259356:1259356125935612609841629Methanosarcina acetivorans C2A, complete genomehypothetical protein8e-85314
NC_003552:4686036:4700665470066547022931629Methanosarcina acetivorans C2A, complete genomehypothetical protein8e-85314
NC_007796:2966386:2983667298366729852861620Methanospirillum hungatei JF-1, complete genomehypothetical protein2e-84313
NC_017094:1339311:1345333134533313469371605Leptospirillum ferrooxidans C2-3, complete genometransposase-like protein1e-83310
NC_007796:3379614:3390096339009633916191524Methanospirillum hungatei JF-1, complete genomehypothetical protein1e-82307
NC_015416:1679188:1703344170334417049571614Methanosaeta concilii GP-6 chromosome, complete genometransposase4e-77289
NC_015416:2723189:2738155273815527397681614Methanosaeta concilii GP-6 chromosome, complete genometransposase4e-77289
NC_012108:2874831:2903929290392929055691641Desulfobacterium autotrophicum HRM2, complete genomearchae-like transposase7e-77288
NC_015416:1645419:1655356165535616569691614Methanosaeta concilii GP-6 chromosome, complete genometransposase1e-76288
NC_003552:4637764:4656704465670446578191116Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-53211
NC_007796:3422000:3438517343851734401351619Methanospirillum hungatei JF-1, complete genome2e-52207
NC_016023:1769925:1793571179357117952561686Bacillus coagulans 36D1 chromosome, complete genometransposase family protein9e-49195
NC_007677:771168:8223648223648240051642Salinibacter ruber DSM 13855, complete genome1e-48194
NC_016023:2163000:2175338217533821770231686Bacillus coagulans 36D1 chromosome, complete genometransposase family protein2e-48194
NC_015634:359500:3771043771043787891686Bacillus coagulans 2-6 chromosome, complete genomeIS4 family transposase2e-48193
NC_015634:2694706:2705717270571727074021686Bacillus coagulans 2-6 chromosome, complete genomeIS4 family transposase2e-48193
NC_006510:1901954:1903563190356319052211659Geobacillus kaustophilus HTA426, complete genometransposase1e-47191
NC_006510:1921541:1938876193887619405341659Geobacillus kaustophilus HTA426, complete genometransposase1e-47191
NC_016593:868500:8724838724838741411659Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetransposase2e-47191
NC_006510:3321426:3345899334589933475571659Geobacillus kaustophilus HTA426, complete genometransposase5e-47189
NC_020210:1704500:1744442174444217461001659Geobacillus sp. GHH01, complete genometransposase6e-47189
NC_006510:3321426:3347712334771233493311620Geobacillus kaustophilus HTA426, complete genometransposase7e-47188
NC_012793:3096095:3122792312279231244501659Geobacillus sp. WCH70, complete genometransposase2e-46187
NC_020210:1275031:1307651130765113093091659Geobacillus sp. GHH01, complete genometransposase2e-46187
NC_020210:1704500:1754160175416017558181659Geobacillus sp. GHH01, complete genometransposase2e-46187
NC_016593:1814500:1837952183795218396101659Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetransposase2e-46187
NC_020210:788639:7910377910377926951659Geobacillus sp. GHH01, complete genometransposase3e-46187
NC_006510:1014500:1027256102725610289141659Geobacillus kaustophilus HTA426, complete genometransposase5e-46186
NC_016023:1769925:1779096177909617807811686Bacillus coagulans 36D1 chromosome, complete genometransposase family protein7e-46185
NC_006510:1014500:1037949103794910396071659Geobacillus kaustophilus HTA426, complete genometransposase7e-46185
NC_016593:981500:1001475100147510031331659Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetransposase1e-45184
NC_016593:981500:9828529828529845101659Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetransposase1e-45184
NC_016593:596500:6175536175536192111659Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetransposase1e-45184
NC_006510:1400000:1418291141829114199491659Geobacillus kaustophilus HTA426, complete genomehypothetical protein7e-45182
NC_006510:887545:9084109084109100681659Geobacillus kaustophilus HTA426, complete genomehypothetical protein7e-45182
NC_016023:1143130:1160683116068311623681686Bacillus coagulans 36D1 chromosome, complete genometransposase family protein6e-45182
NC_016593:353505:3831523831523848101659Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetransposase9e-45181
NC_016593:2447938:2468797246879724704551659Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetransposase9e-45181
NC_013411:334549:3521153521153537731659Geobacillus sp. Y412MC61, complete genometransposase1e-44181
NC_013411:2739989:2762869276286927645271659Geobacillus sp. Y412MC61, complete genometransposase4e-44179
NC_014915:1080793:1083230108323010848881659Geobacillus sp. Y412MC52 chromosome, complete genometransposase7e-44178
NC_013411:1941762:1943286194328619449441659Geobacillus sp. Y412MC61, complete genometransposase7e-44178
NC_020210:1704500:1718466171846617201271662Geobacillus sp. GHH01, complete genometransposase9e-44178
NC_020210:1704500:1734617173461717362781662Geobacillus sp. GHH01, complete genometransposase2e-43177
NC_014915:2092678:2130265213026521319231659Geobacillus sp. Y412MC52 chromosome, complete genometransposase3e-43176
NC_013411:2975364:2990334299033429919921659Geobacillus sp. Y412MC61, complete genometransposase3e-43176
NC_014098:2225174:2231783223178322334891707Bacillus tusciae DSM 2912 chromosome, complete genometransposase IS4 family protein6e-43175
NC_014915:595569:6144526144526161101659Geobacillus sp. Y412MC52 chromosome, complete genometransposase1e-42174
NC_013411:1454465:1474508147450814761661659Geobacillus sp. Y412MC61, complete genometransposase1e-42174
NC_012108:1067876:1074439107443910761151677Desulfobacterium autotrophicum HRM2, complete genometransposase (IS4 family protein)9e-42171
NC_012108:1973861:1984608198460819862841677Desulfobacterium autotrophicum HRM2, complete genometransposase (IS4 family protein)1e-41171
NC_012108:3824977:3843818384381838454941677Desulfobacterium autotrophicum HRM2, complete genometransposase family protein1e-41171
NC_018870:2537350:2554743255474325564431701Thermacetogenium phaeum DSM 12270 chromosome, complete genomeIS4-like transposase6e-41169
NC_014098:3133440:3138547313854731400791533Bacillus tusciae DSM 2912 chromosome, complete genome4e-39163
NC_013205:2610956:2635615263561526372971683Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transposase IS4 family protein9e-37155
NC_013205:576583:5776905776905793721683Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transposase IS4 family protein9e-37155
NC_013205:1548500:1551774155177415534561683Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transposase IS4 family protein9e-37155
NC_013205:1123280:1126058112605811277401683Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transposase IS4 family protein9e-37155
NC_013205:747502:7609277609277626091683Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transposase IS4 family protein9e-37155
NC_013205:1548500:1566102156610215677841683Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transposase IS4 family protein9e-37155
NC_017167:1135137:1148182114818211498821701Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1transposase IS4 family protein2e-35150
NC_016593:3249767:3279696327969632812491554Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetransposase3e-35150
NC_017167:129988:1351131351131368131701Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1transposase IS4 family protein9e-35148
NC_010296:4384000:440445844044584405273816Microcystis aeruginosa NIES-843, complete genometransposase2e-32141
NC_013235:2902617:2905507290550729072251719Nakamurella multipartita DSM 44233, complete genomeTransposase-like protein7e-27122
NC_005125:3446470:347039134703913470822432Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-25117
NC_003552:4637764:465781646578164658313498Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-23110
NC_015416:2967511:297356729735672974199633Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein2e-21104
NC_012108:721005:7210057210057227231719Desulfobacterium autotrophicum HRM2, complete genometransposase (IS4 family protein)2e-21104
NC_012108:4971086:4978722497872249804401719Desulfobacterium autotrophicum HRM2, complete genometransposase (IS4 family protein)2e-21104
NC_006510:3133965:314064331406433141494852Geobacillus kaustophilus HTA426, complete genomehypothetical protein1e-1894.7
NC_018870:1953748:1957900195790019590991200Thermacetogenium phaeum DSM 12270 chromosome, complete genomeIS4-like transposase1e-1585.1
NC_007644:1638083:164510716451071645796690Moorella thermoacetica ATCC 39073, complete genome4e-1583.6
NC_005835:1345790:135599313559931356310318Thermus thermophilus HB27, complete genometransposase1e-1482
NC_003901:1027183:103656610365661036898333Methanosarcina mazei Go1, complete genometransposase2e-1274.3
NC_007796:2607240:262294726229472623449503Methanospirillum hungatei JF-1, complete genome5e-1272.8
NC_008312:7132163:713590071359007136181282Trichodesmium erythraeum IMS101, complete genomehypothetical protein3e-1170.5
NC_009921:6483660:6499663649966365012761614Frankia sp. EAN1pec, complete genomeTransposase-like protein2e-0964.3
NC_013960:2261487:226256622625662262847282Nitrosococcus halophilus Nc4 chromosome, complete genome2e-0964.3
NC_018870:115982:136890136890137585696Thermacetogenium phaeum DSM 12270 chromosome, complete genometransposase1e-0862
NC_007295:533223:5350325350325366901659Mycoplasma hyopneumoniae J, complete genomeputative transposase1e-0861.6
NC_018870:115982:135876135876136391516Thermacetogenium phaeum DSM 12270 chromosome, complete genomeIS4-like transposase2e-0861.2
NC_009921:522000:5604865604865621021617Frankia sp. EAN1pec, complete genomeTransposase-like protein2e-0860.8
NC_006510:3133965:314177531417753142302528Geobacillus kaustophilus HTA426, complete genomehypothetical protein3e-0860.8
NC_015416:2967511:297444929744492974613165Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein4e-0860.1
NC_007332:642000:6454096454096470671659Mycoplasma hyopneumoniae 7448, complete genomeISMHp1 transposase7e-0859.3
NC_015757:1329012:135833313583331359079747Sulfobacillus acidophilus TPY chromosome, complete genome1e-0758.5
NC_007295:618830:6223356223356239931659Mycoplasma hyopneumoniae J, complete genomeputative ISMHp1 transposase2e-0757.8
NC_013205:1275012:1292545129254512943351791Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transposase IS4 family protein8e-0755.8
NC_007796:2607240:262603626260362626251216Methanospirillum hungatei JF-1, complete genometransposase1e-0655.5