Pre_GI: BLASTP Hits

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Query: NC_005126:2063667:2072176 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 2072176, End: 2073780, Length: 1605

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:4604150460415046058591710Pseudomonas aeruginosa PA7 chromosome, complete genometype IVB pilus formation outer membrane protein1e-60234
NC_008463:5246954:5278639527863952802761638Pseudomonas aeruginosa UCBPP-PA14, complete genomeType IV B pilus protein2e-58227
NC_018080:5091772:5123690512369051252641575Pseudomonas aeruginosa DK2 chromosome, complete genometype IVB pilus formation outer membrane protein3e-58226
NC_007507:11000:1213112131138671737Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative PilN-like Bacterial type II and III secretion system protein5e-58226
NC_007005:1705406:1703673170367317054091737Pseudomonas syringae pv. syringae B728a, complete genometype II and III secretion system protein1e-51204
NC_012214:3502992:3515553351555335171991647Erwinia pyrifoliae Ep1/96, complete genomeType IVB pilus formation outer membrane protein3e-49196
NC_004129:5373886:5400859540085954027001842Pseudomonas fluorescens Pf-5, complete genometype IV pilus protein, PilN2e-44181
NC_015850:1155376:1174104117410411757381635Acidithiobacillus caldus SM-1 chromosome, complete genomePilN8e-42172
NC_007950:185500:2030782030782047481671Polaromonas sp. JS666 plasmid 2, complete sequencetype II and III secretion system protein1e-38161
NC_004547:590844:6060136060136076771665Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus protein8e-38158
NC_010682:1624985:1624985162498516266761692Ralstonia pickettii 12J chromosome 1, complete sequencePilN3e-22107
NC_008757:77023:1034111034111050331623Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completelipoprotein3e-1687
NC_010087:265625:2661822661822677861605Burkholderia multivorans ATCC 17616 chromosome 3, completetype II secretory pathway component PulD-like protein1e-1275.5
NC_016616:2699350:2742273274227327439941722Dechlorosoma suillum PS chromosome, complete genometype II secretory pathway, component PulD2e-1274.3
NC_008789:350650:3723233723233739391617Halorhodospira halophila SL1, complete genomepilus (MSHA type) biogenesis protein MshL2e-1170.9
NC_010002:1447711:1452998145299814554572460Delftia acidovorans SPH-1, complete genomegeneral secretion pathway protein D2e-1068.2
NC_014972:3688000:3697159369715936989191761Desulfobulbus propionicus DSM 2032 chromosome, complete genometype II and III secretion system protein3e-1067.4
NC_008786:738791:7583807583807605422163Verminephrobacter eiseniae EF01-2, complete genomegeneral secretion pathway protein D5e-0963.2
NC_014935:711765:7220957220957236301536Nitratifractor saLSUginis DSM 16511 chromosome, complete genomepilus (msha type) biogenesis protein mshl8e-0962.4
NC_015185:1414453:1441743144174314432631521Desulfurobacterium thermolithotrophum DSM 11699 chromosome,type II and III secretion system protein7e-0859.3
NC_015563:5843703:5863155586315558656202466Delftia sp. Cs1-4 chromosome, complete genomegeneral secretion pathway protein D2e-0758.2
NC_015138:4584846:4596363459636345988342472Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completegeneral secretion pathway protein D9e-0755.5
NC_012988:32996:3299632996353802385Methylobacterium extorquens DM4, complete genomeGeneral secretion pathway protein D1e-0655.5
NC_010172:31264:3232532325347092385Methylobacterium extorquens PA1, complete genomegeneral secretion pathway protein D1e-0655.1
NC_008752:4589119:4603617460361746061062490Acidovorax avenae subsp. citrulli AAC00-1, complete genomegeneral secretion pathway protein D3e-0654.3
NC_007498:2475781:2485210248521024878342625Pelobacter carbinolicus DSM 2380, complete genometype IV pilus biogenesis protein PilQ6e-0652.8