Pre_GI: BLASTP Hits

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Query: NC_005126:142500:151310 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 151310, End: 152089, Length: 780

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014623:1633889:163310416331041633892789Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3-oxoadipate CoA-transferase subunit B5e-94343
NC_007963:317291:339037339037339813777Chromohalobacter salexigens DSM 3043, complete genomecoenzyme A transferase3e-90331
NC_014960:216965:233412233412234173762Anaerolinea thermophila UNI-1, complete genome3-oxoadipate CoA-transferase3e-66251
NC_014220:1269870:127075212707521271624873Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeGlutaconate CoA-transferase4e-50198
NC_008578:1827605:184744218474421848227786Acidothermus cellulolyticus 11B, complete genomecoenzyme A transferase2e-47189
NC_011768:79297:851888518886018831Desulfatibacillum alkenivorans AK-01, complete genomecoenzyme A transferase3e-41168
NC_003454:822804:828888828888829691804Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeGlutaconate CoA-transferase subunit B2e-36152
NC_011830:2901346:290357929035792904388810Desulfitobacterium hafniense DCB-2, complete genomecoenzyme A transferase3e-33142
NC_012521:148886:158152158152158919768Rhodococcus opacus B4 plasmid pROB02, complete sequenceputative CoA-transferase beta subunit6e-31134
NC_008697:118859:137598137598138425828Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceglutaconate CoA-transferase1e-23110
NC_016604:2944555:294920729492072950049843Mycobacterium rhodesiae NBB3 chromosome, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase subunit beta2e-1996.7
NC_009717:271385:294816294816295652837Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencecoenzyme A transferase4e-1995.1
NC_013929:7606749:760909776090977609861765Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1687
NC_018750:1835500:185593618559361856667732Streptomyces venezuelae ATCC 10712, complete genomeputative CoA-transferase subunit beta8e-1684.3
NC_007517:2494000:2494946249494624967451800Geobacter metallireducens GS-15, complete genomeCoenzyme A transferase3e-1479
NC_008699:2916752:291763029176302918400771Nocardioides sp. JS614, complete genomeputative CoA transferase beta subunit1e-1377
NC_020133:5710661:571227657122765713019744Mycobacterium liflandii 128FXT, complete genomeCoA-transferase5e-1375.1
NC_010612:6113155:611699361169936117736744Mycobacterium marinum M, complete genomeCoA-transferase (beta subunit)7e-1374.3
NC_013849:985978:100652810065281007247720Ferroglobus placidus DSM 10642 chromosome, complete genomecoenzyme A transferase5e-1168.6
NC_012785:638000:644587644587645246660Kosmotoga olearia TBF 19.5.1, complete genome3-oxoacid CoA-transferase, B subunit2e-0963.5
NC_007347:1596040:1612668161266816146772010Ralstonia eutropha JMP134 chromosome 1, complete sequenceCoenzyme A transferase3e-0962.4
NC_009454:1577319:1611070161107016126321563Pelotomaculum thermopropionicum SI, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase4e-0858.5
NC_020291:2487575:249613724961372496796660Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomebutyrate--acetoacetate CoA-transferase subunit B6e-0858.2
NC_014614:1259236:127595912759591276606648Clostridium sticklandii, complete genomeacetyl-CoA:acetoacetyl-CoA transferase, beta subunit2e-0756.2
NC_014632:312000:3149883149883165621575Ilyobacter polytropus DSM 2926 chromosome, complete genomepropionate CoA-transferase3e-0755.8
NC_011283:2323687:234602723460272346683657Klebsiella pneumoniae 342 chromosome, complete genome3-oxoacid CoA-transferase subunit B1e-0653.5
NC_017243:3141500:3161896316189631634551560Brachyspira intermedia PWS/A chromosome, complete genomecoenzyme A transferase1e-0653.5
NC_010003:1126800:115088611508861151536651Petrotoga mobilis SJ95, complete genome3-oxoacid CoA-transferase, B subunit2e-0653.1
NC_014330:697429:7077997077997093971599Brachyspira pilosicoli 95/1000 chromosome, complete genomebifunctional acetyl-CoA:acetoacetyl-CoA transferase subunit alpha/beta2e-0652.8
NC_019908:2496149:2509209250920925108101602Brachyspira pilosicoli P43/6/78 chromosome, complete genomebifunctional acetyl-CoA:acetoacetyl-CoA transferase subunit alpha/beta3e-0652.8
NC_016751:469289:475170475170475820651Marinitoga piezophila KA3 chromosome, complete genome3-oxoacid CoA-transferase subunit B3e-0652.4
NC_001264:28266:5812258122595161395Deinococcus radiodurans R1 chromosome 2, complete sequencesuccinyl-CoA:3-ketoacid-CoA transferase, putative4e-0652
NC_014958:557208:581357581357581986630Deinococcus maricopensis DSM 21211 chromosome, complete genome3-oxoacid CoA-transferase subunit B4e-0652
NC_015737:2691246:2738530273853027401131584Clostridium sp. SY8519, complete genomehypothetical protein7e-0651.2
NC_004193:2692136:270086827008682701530663Oceanobacillus iheyensis HTE831, complete genomebutyate-acetoacetate CA-transferase large chain8e-0651.2
NC_015514:3351052:335536733553673356041675Cellulomonas fimi ATCC 484 chromosome, complete genome3-oxoacid CoA-transferase subunit B8e-0651.2