Pre_GI: BLASTP Hits

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Query: NC_005126:142500:150438 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 150438, End: 151313, Length: 876

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014623:1633889:163388916338891634749861Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglutaconate CoA-transferase subunit a4e-98358
NC_007963:317291:338219338219339040822Chromohalobacter salexigens DSM 3043, complete genomecoenzyme A transferase1e-97356
NC_014960:216965:234177234177235079903Anaerolinea thermophila UNI-1, complete genome3-oxoadipate:succinyl-CoA transferase, B subunit7e-63240
NC_014220:1269870:127162712716271272580954Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomecoenzyme A transferase2e-25115
NC_011768:79297:8414984149851951047Desulfatibacillum alkenivorans AK-01, complete genomeGlutaconate CoA-transferase7e-23107
NC_008578:1827605:184822418482241849177954Acidothermus cellulolyticus 11B, complete genomeGlutaconate CoA-transferase3e-21102
NC_016604:2944555:294828729482872949210924Mycobacterium rhodesiae NBB3 chromosome, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase subunit alpha3e-2099.4
NC_008697:118859:138422138422139339918Nocardioides sp. JS614 plasmid pNOCA01, complete sequencecoenzyme A transferase5e-2098.2
NC_003454:822804:827920827920828885966Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeGlutaconate CoA-transferase subunit A1e-1997.4
NC_013849:985978:100724410072441008029786Ferroglobus placidus DSM 10642 chromosome, complete genomecoenzyme A transferase1e-1790.5
NC_011830:2901346:290260629026062903574969Desulfitobacterium hafniense DCB-2, complete genomeGlutaconate CoA-transferase1e-1687
NC_007517:2494000:2494946249494624967451800Geobacter metallireducens GS-15, complete genomeCoenzyme A transferase2e-1583.6
NC_009717:271385:295649295649296638990Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencecoenzyme A transferase7e-1581.3
NC_012521:148886:157229157229158155927Rhodococcus opacus B4 plasmid pROB02, complete sequenceputative CoA-transferase alpha subunit1e-1480.1
NC_008699:2916752:291675229167522917633882Nocardioides sp. JS614, complete genomecoenzyme A transferase6e-0858.2
NC_013929:7606749:760984076098407610688849Streptomyces scabiei 87.22 chromosome, complete genomeCoA-transferase9e-0857.8
NC_018750:1835500:185508218550821855939858Streptomyces venezuelae ATCC 10712, complete genomeputative CoA-transferase subunit alpha3e-0652.4