Pre_GI: BLASTP Hits

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Query: NC_005126:1223042:1252132 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1252132, End: 1252368, Length: 237

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:611178:630416630416630655240Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-22104
NC_013892:1483000:149276814927681493004237Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-2098.6
NC_014228:3534378:353896035389603539196237Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-2097.8
NC_014228:3391500:342810934281093428345237Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-2097.4
NC_013892:3278647:330503233050323305268237Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-2097.1
NC_009832:4521585:455056245505624550798237Serratia proteamaculans 568, complete genomehypothetical protein4e-1993.2
NC_009832:358291:381855381855382097243Serratia proteamaculans 568, complete genomehypothetical protein1e-1684.7
NC_015567:313035:336041336041336283243Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein2e-1684
NC_015566:316340:335876335876336118243Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein2e-1684
NC_008463:5313527:533259753325975332836240Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein6e-0649.7
NC_009656:4527457:463684446368444637083240Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein6e-0649.7