Pre_GI: BLASTP Hits

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Query: NC_005126:1223042:1251860 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1251860, End: 1252135, Length: 276

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009708:4182460:418974241897424190050309Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-2097.1
NC_015566:316340:335541335541335876336Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-1891.3
NC_015567:313035:335706335706336041336Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-1891.3
NC_009832:358291:381523381523381855333Serratia proteamaculans 568, complete genomeplasmid conserved hypothetical protein RAQPRD1e-1788.2
NC_004547:611178:630094630094630414321Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-1787.8
NC_014029:331919:365919365919366248330Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-1786.7
NC_009832:4521585:455079545507954551124330Serratia proteamaculans 568, complete genomeplasmid conserved hypothetical protein RAQPRD5e-1786.3
NC_013892:3278647:330470633047063305032327Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-1375.1
NC_014228:3391500:342778334277833428112330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-1373.6
NC_014228:3534378:353863435386343538963330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein6e-1372.8
NC_016818:3851542:387403138740313874291261Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein7e-1372.8
NC_020181:3328844:335158333515833351894312Enterobacter aerogenes EA1509E, complete genomeFIG01045568: hypothetical protein1e-1271.6
NC_013892:1483000:149300114930011493330330Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-1270.9
NC_013716:3512950:353799435379943538320327Citrobacter rodentium ICC168, complete genomehypothetical protein1e-1168.6
NC_004129:5373886:543045854304585430811354Pseudomonas fluorescens Pf-5, complete genomeconserved hypothetical protein TIGR016905e-0959.7
NC_009656:4527457:463650946365094636847339Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-0755.5
NC_011901:2983555:299367429936742994024351Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein1e-0755.5
NC_012560:3667177:368687836868783687234357Azotobacter vinelandii DJ, complete genomePlasmid hypothetical protein, RAQPRD2e-0754.3
NC_021150:3667176:368687736868773687233357Azotobacter vinelandii CA6, complete genomePlasmid hypothetical protein, RAQPRD2e-0754.3
NC_018080:5091772:516156551615655161858294Pseudomonas aeruginosa DK2 chromosome, complete genometype III effector Hop protein4e-0753.5
NC_015422:1876102:189598418959841896349366Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein4e-0753.5
NC_008463:5313527:533224153322415332600360Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative candidate type III effector Hop protein4e-0753.5
NC_010170:1498253:153737015373701537753384Bordetella petrii, complete genomehypothetical protein3e-0753.5
NC_009138:1974935:202203020220302022410381Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide5e-0753.1
NC_008344:49039:918229182292193372Nitrosomonas eutropha C91, complete genomehypothetical protein9e-0752.4
NC_012912:483390:508788508788509165378Dickeya zeae Ech1591, complete genomehypothetical protein2e-0651.2
NC_008825:2525380:255245025524502552797348Methylibium petroleiphilum PM1, complete genomehypothetical protein7e-0649.3