Pre_GI: BLASTP Hits

Some Help

Query: NC_005126:1223042:1227913 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1227913, End: 1228974, Length: 1062

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:590844:6042376042376055531317Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus protein8e-50197
NC_004129:5373886:5399717539971754008621146Pseudomonas fluorescens Pf-5, complete genomepilL protein2e-42173
NC_009656:4527457:4603026460302646041501125Pseudomonas aeruginosa PA7 chromosome, complete genometype IV B pilus protein1e-41170
NC_007005:1705406:1705406170540617065391134Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein5e-32139
NC_014029:331919:358410358410359042633Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-29128
NC_009832:358291:373757373757374401645Serratia proteamaculans 568, complete genometype IV B pilus protein2e-28127
NC_016845:4539381:454404645440464544615570Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,type IV B pilus protein7e-28125
NC_015567:313035:328376328376329020645Serratia sp. AS9 chromosome, complete genometype IV B pilus protein2e-27123
NC_015566:316340:328211328211328855645Serratia sp. AS12 chromosome, complete genometype IV B pilus protein2e-27123
NC_018080:5091772:5122434512243451235551122Pseudomonas aeruginosa DK2 chromosome, complete genometype IV B pilus protein1e-26120
NC_008463:5246954:5277443527744352785671125Pseudomonas aeruginosa UCBPP-PA14, complete genometype IV B pilus protein1e-26120
NC_013892:3278647:329832832983283298864537Xenorhabdus bovienii SS-2004 chromosome, complete genomePilL protein (fragment)3e-26119
NC_014228:3391500:342119734211973421733537Xenorhabdus nematophila ATCC 19061, complete genomeputative pilL protein (fragment)1e-24114
NC_013716:3512950:354470735447073545138432Citrobacter rodentium ICC168, complete genome9e-24111
NC_020181:3328844:334341233434123343876465Enterobacter aerogenes EA1509E, complete genomePilL2e-23110
NC_013892:1483000:149830414983041498840537Xenorhabdus bovienii SS-2004 chromosome, complete genomePilL protein2e-23109
NC_009512:3282500:331470433147043315219516Pseudomonas putida F1, complete genomehypothetical protein2e-21103
NC_016830:3869572:392775739277573928299543Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-21102
NC_008782:2326439:234708123470812347692612Acidovorax sp. JS42, complete genomehypothetical protein1e-20101
NC_015379:2417312:245286824528682453395528Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein, putative exported protein4e-2099
NC_009138:1974935:201019220101922010812621Herminiimonas arsenicoxydans, complete genomehypothetical protein6e-2098.6
NC_012731:600518:618745618745619452708Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative type IV pilus protein1e-1997.4
NC_010002:4544818:455769445576944558272579Delftia acidovorans SPH-1, complete genomeputative secreted protein1e-1997.4
NC_010170:4533416:453812745381274538705579Bordetella petrii, complete genomeputative lipoprotein1e-1997.4
NC_012912:483390:517914517914518483570Dickeya zeae Ech1591, complete genomeputative secreted protein2e-1997.1
NC_010170:1498253:153070915307091531308600Bordetella petrii, complete genomeputative secreted protein2e-1996.7
NC_014532:3555550:357098835709883571638651Halomonas elongata DSM 2581, complete genomeK02487 type IV pili sensor histidine kinase/response regulator5e-1995.5
NC_008825:2525380:254173025417302542311582Methylibium petroleiphilum PM1, complete genomehypothetical protein6e-1995.1
NC_012691:2614603:265491526549152655478564Tolumonas auensis DSM 9187, complete genomehypothetical protein7e-1995.1
NC_008752:558828:575379575379575948570Acidovorax avenae subsp. citrulli AAC00-1, complete genomePilL protein1e-1894.4
NC_011662:1058794:106346710634671064039573Thauera sp. MZ1T, complete genomehypothetical protein1e-1894.4
NC_011992:1234610:123873112387311239330600Acidovorax ebreus TPSY, complete genomeputative secreted protein1e-1790.9
NC_006513:1379735:146161514616151462184570Azoarcus sp. EbN1, complete genomehypothetical protein1e-1687.4
NC_008344:49039:989569895699537582Nitrosomonas eutropha C91, complete genomehypothetical protein7e-1582
NC_015572:2186394:219623621962362196805570Methylomonas methanica MC09 chromosome, complete genomehypothetical protein3e-1273.2
NC_012214:3502992:351763635176363518028393Erwinia pyrifoliae Ep1/96, complete genometype IV pilus biogenesis outer membrane protein, fragment3e-1170.1
NC_007484:667879:675757675757676251495Nitrosococcus oceani ATCC 19707, complete genomePilL protein2e-0963.5
NC_008739:41793:438064380644255450Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencePilL protein3e-0963.2
NC_007507:11000:112951129512134840Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative PilL-like lipoprotein7e-0858.5
NC_005126:2063667:207183020718302072171342Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-0755.8