Pre_GI: BLASTP Hits

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Query: NC_005126:1223042:1223042 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1223042, End: 1223710, Length: 669

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014804:1183780:120573212057321206298567Thermococcus barophilus MP chromosome, complete genomePrpC-like protein serine/threonine phosphatase2e-1065.9
NC_008054:1194000:121256312125631213318756Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeSerine/threonine protein phosphatase6e-1064.3
NC_015865:3657:274342743428180747Thermococcus sp. 4557 chromosome, complete genomeprotein serine/threonine phosphatase1e-0860.1
NC_008312:5105557:5116118511611851180191902Trichodesmium erythraeum IMS101, complete genomeprotein serine/threonine phosphatases1e-0859.7
NC_020134:2237421:224167422416742242408735Clostridium stercorarium subsp. stercorarium DSM 8532, completeserine/threonine phosphatase Stp8e-0857.4
NC_015865:3657:1747917479202472769Thermococcus sp. 4557 chromosome, complete genomeSerine/threonine protein phosphatase 2C (PP2C)2e-0756.2
NC_020291:1725725:1728475172847517303251851Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeserine/threonine protein phosphatase3e-0755.1
NC_016587:523215:5382365382365393151080Azospirillum lipoferum 4B plasmid AZO_p4, complete sequenceputative serine/threonine phosphatase5e-0754.7
NC_014657:944000:948013948013948750738Caldicellulosiruptor owensensis OL chromosome, complete genomeprotein serine/threonine phosphatase9e-0753.9
NC_008781:1973826:198489119848911985649759Polaromonas naphthalenivorans CJ2, complete genomeprotein phosphatase 2C domain protein6e-0651.2
NC_014960:1670778:168888316888831689794912Anaerolinea thermophila UNI-1, complete genomeputative protein phosphatase6e-0650.8