Pre_GI: BLASTP Hits

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Query: NC_005027:6143730:6142717 Rhodopirellula baltica SH 1, complete genome

Start: 6142717, End: 6143733, Length: 1017

Host Lineage: Rhodopirellula baltica; Rhodopirellula; Planctomycetaceae; Planctomycetales; Planctomycetes; Bacteria

General Information: Rhodopirellula baltica SH 1 (DSM 10527) was isolated from the water column of Kieler Bucht (a fiord near the city of Kiel in Germany) and seems to be strongly involved in the first part of the degradation of complex macromolecules produced by autotrophic organisms like algae and cyanobacteria. Common marine bacterium. The representatives of this phylum are quite abundant in terrestrial and marine habitats, however there is currently only a few characterized species. Among them is the recently discovered and long sought after "Anammox" bacterium capable of anaerobic ammonium oxidation, a process of high importance in removing ammonia from waste waters.The Planctomycetales demonstrate unique combinations of morphological and ultrastructural properties, such as a membrane-bound nucleus, budding replication, the presence of so called crater-like structures and "puckers" of unknown function on the cell surface, a diverse range of extracellular appendages (e.g., multifibrillar stalks), and a lack of peptidoglycan in their cell wall. This family includes organisms which are important components of the biosphere. By their mineralization of marine snow particles (phytodetrital macroaggregates) planctomycetes have a profound impact on global biogeochemistry and climate by affecting exchange processes between the geosphere and atmosphere. This organism is a pear-shaped bacterium having a life cycle consisting of an aggregate-forming sessile (non-motile) form and a motile swarmer cell.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006138:799174:802144802144803055912Desulfotalea psychrophila LSv54, complete genometranscriptional activator protein (IlvY)8e-0961.6
NC_004547:1062410:106655510665551067454900Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeLysR-family transcriptional regulator9e-0961.6
NC_016077:1876119:187611918761191877003885Acidaminococcus intestini RyC-MR95 chromosome, complete genometranscriptional regulator9e-0961.2
NC_010718:2513917:253360525336052534507903Natranaerobius thermophilus JW/NM-WN-LF, complete genometranscriptional regulator, LysR family5e-0755.5
NC_011184:2840713:284766328476632848475813Vibrio fischeri MJ11 chromosome I, complete sequenceHTH-type transcriptional regulator IlvY2e-0653.5
NC_010634:166900:170161170161171042882Yersinia pseudotuberculosis PB1/+, complete genomeLysR family transcriptional regulator2e-0653.1
NC_006155:172313:175574175574176455882Yersinia pseudotuberculosis IP 32953, complete genomeLysR-family transcriptional regulatory protein2e-0653.1
NC_009454:1389974:139267713926771393588912Pelotomaculum thermopropionicum SI, complete genometranscriptional regulator3e-0653.1
NC_010170:1324758:135075613507561351655900Bordetella petrii, complete genometranscriptional regulator, LysR-family3e-0652.8