Pre_GI: BLASTP Hits

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Query: NC_004631:799810:813172 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 813172, End: 813651, Length: 480

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:2179688:219028521902852190764480Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-89326
NC_011147:792489:805919805919806398480Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-85312
NC_006511:792543:805973805973806452480Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-85312
NC_016832:799764:813243813243813605363Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-65245
NC_011149:2179592:219020521902052190567363Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-63240
NC_007347:1:197611976120273513Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein9e-2095.9
NC_007347:1:155841558416255672Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein3e-1994
NC_013956:4579759:458526145852614585542282Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein5e-1580.1