Pre_GI: BLASTP Hits

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Query: NC_004631:799810:807944 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 807944, End: 808561, Length: 618

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:2179688:219537521953752195992618Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-120429
NC_016832:799764:807901807901808515615Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-119427
NC_011149:2179592:219538221953822195999618Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein6e-116416
NC_011147:792489:800599800599801216618Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-116416
NC_006511:792543:800653800653801270618Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein7e-116416
NC_012125:1632150:164028216402821640899618Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-115414
NC_006905:2235607:225231322523132252930618Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein8e-115412
NC_008253:2198583:220275422027542203368615Escherichia coli 536, complete genomehypothetical protein6e-34143
NC_004431:2444972:245222124522212452835615Escherichia coli CFT073, complete genomehypothetical protein6e-34143