Pre_GI: BLASTP Hits

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Query: NC_004631:4381724:4402488 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 4402488, End: 4403267, Length: 780

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4397074:441783844178384418617780Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-127455
NC_016832:4368948:438971543897154390491777Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-127453
NC_012125:4481808:450497845049784505754777Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-127453
NC_015566:316340:317799317799318542744Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein2e-56219
NC_015567:313035:317964317964318707744Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein2e-56219
NC_009832:358291:363199363199363942744Serratia proteamaculans 568, complete genomeDomain of unknown function DUF18455e-56217
NC_014029:331919:352680352680353423744Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-54212
NC_014228:3505320:351882535188253519550726Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein8e-53207
NC_013892:3278647:329139432913943292119726Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-52206
NC_013892:1503162:150515815051581505883726Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-52206
NC_012779:305969:328945328945329700756Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-52204
NC_010102:4477836:450050645005064501228723Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-51202
NC_014228:3391500:341407334140733414798726Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-51201
NC_016845:4539381:454590845459084546630723Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-45182
NC_004547:590844:598803598803599600798Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein8e-45180
NC_010554:2872000:287701328770132877717705Proteus mirabilis HI4320, complete genomehypothetical protein8e-41167
NC_013716:3512950:354671335467133547411699Citrobacter rodentium ICC168, complete genomehypothetical protein3e-26118
NC_004129:5373886:539032153903215391052732Pseudomonas fluorescens Pf-5, complete genomehypothetical protein7e-24110
NC_018080:5091772:511150951115095112237729Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-23110
NC_008344:49039:116022116022116822801Nitrosomonas eutropha C91, complete genomehypothetical protein5e-23108
NC_020181:3328844:334125733412573341826570Enterobacter aerogenes EA1509E, complete genomeFIG141694: hypothetical protein in PFGI-1-like cluster1e-22107
NC_012691:2614603:262793826279382628726789Tolumonas auensis DSM 9187, complete genomeDomain of unknown function DUF18457e-23107
NC_008463:5246954:526502252650225265750729Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-22106
NC_009512:3282500:330707933070793307834756Pseudomonas putida F1, complete genomeDomain of unknown function DUF18452e-22106
NC_015379:2417312:245907724590772459862786Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein4e-22105
NC_010688:2781624:280464828046482805403756Xanthomonas campestris pv. campestris, complete genomehypothetical protein7e-22104
NC_007086:2477040:248037624803762481131756Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein7e-22104
NC_009656:4527457:459115145911514592020870Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-22104
NC_010170:1103224:110243311024331103227795Bordetella petrii, complete genomeputative transposon1e-21103
NC_009138:1974935:198907719890771989856780Herminiimonas arsenicoxydans, complete genomehypothetical protein1e-21103
NC_008752:585884:608648608648609481834Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein2e-21103
NC_010170:1498253:150039215003921501171780Bordetella petrii, complete genomehypothetical protein3e-21102
NC_010170:1324758:135757413575741358395822Bordetella petrii, complete genomehypothetical protein2e-21102
NC_007005:1705406:171397217139721714751780Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein1e-2099.8
NC_013421:1780722:179981717998171800635819Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF18453e-2099
NC_016830:3869572:393560039356003936355756Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-2098.6
NC_012660:2143376:214654721465472147302756Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein7e-2097.8
NC_015733:2658337:265833726583372659092756Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-1996.3
NC_002488:1638946:169790816979081698657750Xylella fastidiosa 9a5c, complete genomehypothetical protein5e-1994.7
NC_010519:1963256:198759619875961988354759Haemophilus somnus 2336 chromosome, complete genomehypothetical protein8e-1890.9
NC_008739:41793:454214542146230810Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencehypothetical protein1e-1377.4
NC_014532:3555550:356008735600873560911825Halomonas elongata DSM 2581, complete genomehypothetical protein2e-1376.3
NC_012913:1041969:104714210471421047909768Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein2e-1066.2