Pre_GI: BLASTP Hits

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Query: NC_004605:741000:760133 Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete

Start: 760133, End: 761533, Length: 1401

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014966:638355:6570056570056583331329Vibrio vulnificus MO6-24/O chromosome II, complete sequenceprotein TadG, associated with Flp pilus assembly4e-111402
NC_004460:81687:1004551004551017351281Vibrio vulnificus CMCP6 chromosome II, complete sequenceFlp pilus assembly protein TadG9e-111400
NC_005140:660305:6790276790276803551329Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein1e-110400