Pre_GI: BLASTP Hits

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Query: NC_004605:741000:759553 Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete

Start: 759553, End: 760146, Length: 594

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004460:81687:9987299872100453582Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein9e-49192
NC_005140:660305:678429678429679073645Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein2e-48192
NC_014966:638355:656497656497657051555Vibrio vulnificus MO6-24/O chromosome II, complete sequenceflp pilus assembly surface protein TadF, ATP/GTP-binding motif protein7e-43173