Pre_GI: BLASTP Hits

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Query: NC_004605:741000:751162 Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete

Start: 751162, End: 751914, Length: 753

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014966:638355:648000648000648773774Vibrio vulnificus MO6-24/O chromosome II, complete sequenceflp pilus assembly protein RcpC/CpaB3e-47188
NC_005140:660305:669977669977670795819Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein1e-46186
NC_004460:81687:914659146592175711Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein3e-44178