Pre_GI: BLASTP Hits

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Query: NC_004603:370320:386475 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 386475, End: 387212, Length: 738

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015633:2801321:280584628058462806841996Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein2e-137487
NC_010498:4899167:490569749056974906695999Escherichia coli SMS-3-5, complete genomehypothetical protein7e-84310
NC_010102:4745949:476272347627234763718996Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-83307
NC_015761:4355335:437046343704634371458996Salmonella bongori NCTC 12419, complete genomehypothetical protein5e-82303
NC_014840:76232:8361183611846121002Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceputative inner membrane protein8e-76283
NC_004431:5123325:512822251282225128935714Escherichia coli CFT073, complete genomehypothetical protein3e-55215
NC_013364:5255700:526457152645715265257687Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-54213
NC_004431:5123325:513024951302495130578330Escherichia coli CFT073, complete genomehypothetical protein6e-23107
NC_008322:2077628:210396821039682104846879Shewanella sp. MR-7, complete genomehypothetical protein3e-1995.5
NC_014366:1435785:1439570143957014407541185Gamma proteobacterium HdN1, complete genomehypothetical protein3e-1995.5
NC_009778:567000:5851635851635863501188Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-1580.5
NC_007722:2954876:2977731297773129788671137Erythrobacter litoralis HTCC2594, complete genomehypothetical protein1e-1480.5
NC_020418:116500:1240131240131251761164Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-1479
NC_013364:5255700:526538552653855265567183Escherichia coli O111:H- str. 11128, complete genome4e-1271.6
NC_009975:1712577:1726351172635117274271077Methanococcus maripaludis C6, complete genomehypothetical protein1e-1066.6
NC_010163:614634:627377627377628363987Acholeplasma laidlawii PG-8A chromosome, complete genomehypothetical protein7e-1064.3
NC_014410:482193:4963794963794973891011Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,hypothetical protein5e-0858.2