Pre_GI: BLASTP Hits

Some Help

Query: NC_004603:1897532:1923594 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1923594, End: 1923686, Length: 93

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013456:1819421:18303681830368183046093Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein4e-0960.5
NC_016613:1960811:19745621974562197465493Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein4e-0960.1
NC_016613:1960811:19708801970880197097293Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein4e-0960.1
NC_013456:1743046:17604431760443176053593Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein3e-0857
NC_013456:1743046:17593561759356175944893Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein4e-0856.6
NC_016446:49618:76062760627615493Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein1e-0755.1
NC_016945:324519:35081335081335090593Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-0755.1
NC_016613:2139276:214968121496812149815135Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein2e-0754.7
NC_004603:1897532:19062261906226190631893Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein2e-0754.7
NC_013456:1819421:18232801823280182337293Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein5e-0753.1
NC_013456:1743046:17690261769026176911893Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein6e-0752.8
NC_016613:1960811:19678671967867196795993Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein6e-0752.8
NC_013456:1819421:184026218402621840387126Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein1e-0651.6
NC_018679:3843870:38615573861557386164993Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completehypothetical protein3e-0650.4
NC_014966:328056:337110337110337241132Vibrio vulnificus MO6-24/O chromosome II, complete sequencehypothetical protein3e-0650.4
NC_005139:1784000:188415218841521884286135Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-0650.4
NC_014965:1428902:153420915342091534370162Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein4e-0650.1
NC_013456:1819421:18378451837845183793793Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein4e-0650.1
NC_016614:1178000:11840981184098118419093Vibrio sp. EJY3 chromosome 2, complete sequencehypothetical protein6e-0649.7
NC_005139:1784000:183897218389721839097126Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein7e-0649.3
NC_016945:324519:34625134625134634393Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein8e-0648.9