Pre_GI: BLASTP Hits

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Query: NC_004603:1897532:1912730 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1912730, End: 1912822, Length: 93

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016613:1960811:19714941971494197158693Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein6e-1062.8
NC_013456:1743046:17567521756752175684493Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein3e-0753.9
NC_013456:1819421:18311571831157183124993Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein3e-0753.5
NC_013456:1819421:18280881828088182818093Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein5e-0753.1
NC_013456:1743046:17690261769026176911893Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein1e-0651.6
NC_016945:324519:34625134625134634393Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein3e-0650.4
NC_014965:1428902:153420915342091534370162Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein6e-0649.7
NC_013456:1819421:18378451837845183793793Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein5e-0649.7
NC_016945:324519:35081335081335090593Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein7e-0649.3
NC_016446:49618:76062760627615493Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein7e-0649.3
NC_013456:1743046:17593561759356175944893Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein9e-0648.9
NC_014965:1428902:151623915162391516352114Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein9e-0648.9
NC_013456:1819421:18232801823280182337293Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein1e-0548.9