Pre_GI: BLASTP Hits

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Query: NC_004578:934867:951854 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 951854, End: 952603, Length: 750

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1636875:164016416401641640913750Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein4e-125447
NC_009656:4527457:463137046313704632116747Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-83308
NC_018080:5091772:515637851563785157124747Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-83308
NC_004129:5373886:542770154277015428450750Pseudomonas fluorescens Pf-5, complete genomehypothetical protein1e-78292
NC_008463:5313527:532795353279535328603651Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-73275
NC_008752:558828:569843569843570592750Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein7e-56217
NC_011901:2983555:298625529862552987004750Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein6e-54210
NC_008825:2525380:254705825470582547807750Methylibium petroleiphilum PM1, complete genomehypothetical protein6e-52204
NC_008782:2326439:234158523415852342334750Acidovorax sp. JS42, complete genomehypothetical protein8e-52203
NC_015422:1876102:187941418794141880163750Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element membrane protein2e-51202
NC_011662:1041725:105804810580481058797750Thauera sp. MZ1T, complete genomehypothetical protein2e-51202
NC_011662:1058794:105804810580481058797750Thauera sp. MZ1T, complete genomehypothetical protein2e-51202
NC_008344:49039:935309353094279750Nitrosomonas eutropha C91, complete genomehypothetical protein5e-50197
NC_003919:2639080:264243026424302643179750Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein7e-50197
NC_006513:1379735:145619314561931456942750Azoarcus sp. EbN1, complete genomehypothetical protein1e-49196
NC_012912:483390:512527512527513276750Dickeya zeae Ech1591, complete genomehypothetical protein2e-48192
NC_010170:4533416:453265845326584533419762Bordetella petrii, complete genomehypothetical protein1e-46186
NC_010002:4544818:456297945629794563740762Delftia acidovorans SPH-1, complete genomehypothetical protein1e-46186
NC_009138:1974935:201550420155042016253750Herminiimonas arsenicoxydans, complete genomehypothetical protein3e-46185
NC_011992:1234610:123461012346101235371762Acidovorax ebreus TPSY, complete genomehypothetical protein7e-46184
NC_010170:1498253:153599415359941536743750Bordetella petrii, complete genomehypothetical protein4e-45181
NC_015379:2417312:244803424480342448783750Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-44179
NC_012691:2614603:266018026601802660929750Tolumonas auensis DSM 9187, complete genomehypothetical protein4e-44177
NC_014532:3555550:357942535794253580123699Halomonas elongata DSM 2581, complete genomehypothetical protein3e-40165
NC_013892:3278647:330214733021473302905759Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-35149
NC_014228:3391500:342500934250093425767759Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-34145
NC_013892:1483000:149426014942601495018759Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein8e-34144
NC_009832:358291:379739379739380497759Serratia proteamaculans 568, complete genomehypothetical protein7e-34144
NC_015566:316340:334193334193334951759Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element membrane protein5e-34144
NC_015567:313035:334358334358335116759Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element membrane protein5e-34144
NC_007484:667879:680571680571681302732Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein2e-31135
NC_005126:1223042:124931012493101250062753Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-30133
NC_014029:331919:365028365028365684657Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-30130
NC_009708:4182460:419473741947374195489753Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-29129
NC_004547:611178:628306628306629061756Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-26119
NC_016830:3869572:391994739199473920381435Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein3e-22105
NC_020181:3328844:334830633483063348989684Enterobacter aerogenes EA1509E, complete genomehypothetical protein4e-1375.1
NC_016830:3869572:392280539228053923116312Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-0859.7
NC_012731:600518:614926614926615558633Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein8e-0857.4