Pre_GI: BLASTP Hits

Some Help

Query: NC_004578:934867:933947 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 933947, End: 934870, Length: 924

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:3667176:368888736888873689810924Azotobacter vinelandii CA6, complete genomehypothetical protein5e-97354
NC_012560:3667177:368888836888883689811924Azotobacter vinelandii DJ, complete genomehypothetical protein5e-97354
NC_018080:5091772:516351851635185164402885Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein7e-93340
NC_008463:5313527:533426053342605335144885Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-92339
NC_009656:4527457:463850746385074639391885Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein7e-92337
NC_015422:1876102:189808518980851898999915Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein2e-84312
NC_010170:1498253:153946815394681540400933Bordetella petrii, complete genomeputative secreted protein1e-80300
NC_009138:1974935:202412220241222025039918Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide1e-80300
NC_011662:1017933:104314810431481044062915Thauera sp. MZ1T, complete genomehypothetical protein2e-80298
NC_011662:1041725:104314810431481044062915Thauera sp. MZ1T, complete genomehypothetical protein2e-80298
NC_004129:5373886:543243754324375433348912Pseudomonas fluorescens Pf-5, complete genomehypothetical protein8e-80297
NC_011992:1213726:123041312304131231330918Acidovorax ebreus TPSY, complete genomeputative secreted protein3e-79295
NC_006513:1379735:144033814403381441255918Azoarcus sp. EbN1, complete genomehypothetical protein9e-79293
NC_008344:49039:892328923290134903Nitrosomonas eutropha C91, complete genomeputative secreted protein7e-78290
NC_011901:2983555:299573029957302996617888Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein8e-78290
NC_003919:2639080:265683626568362657828993Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein9e-77286
NC_015726:2862500:288322528832252884145921Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein1e-75283
NC_012912:483390:506202506202507095894Dickeya zeae Ech1591, complete genomeputative signal peptide3e-75281
NC_012691:2614603:266453326645332665435903Tolumonas auensis DSM 9187, complete genomeputative secreted protein3e-73275
NC_016830:3869572:391433839143383915150813Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-71268
NC_012660:2045398:210663621066362107448813Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein5e-71268
NC_015379:2417312:244443624444362445323888Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein1e-68260
NC_009708:4182460:418723441872344188100867Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-62238
NC_014228:3534378:354064435406443541480837Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-61237
NC_010554:2789722:281956128195612820457897Proteus mirabilis HI4320, complete genomehypothetical protein7e-60231
NC_009832:4521585:454817345481734549090918Serratia proteamaculans 568, complete genomehypothetical protein1e-59230
NC_013892:1483000:149048414904841491320837Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-59229
NC_013716:3512950:353562335356233536411789Citrobacter rodentium ICC168, complete genomehypothetical protein3e-59228
NC_014029:331919:367966367966368877912Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-58227
NC_013892:3278647:330671633067163307552837Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-57221
NC_015566:316340:337581337581338492912Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein6e-57221
NC_004547:611178:632045632045632971927Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-54213
NC_012731:600518:604793604793605623831Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-49195
NC_015572:2186394:222013022201302220981852Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein2e-32139