Pre_GI: BLASTP Hits

Some Help

Query: NC_004578:5916711:5921091 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 5921091, End: 5921993, Length: 903

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:4411388:4438234443823444395771344Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein7e-67254
NC_005773:5734733:5746517574651757479831467Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein1e-27124
NC_010322:3084834:3097315309731530988021488Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein3e-26119
NC_005773:1851116:1861521186152118629871467Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein7e-25114
NC_002947:3492379:3504565350456535057401176Pseudomonas putida KT2440, complete genomehypothetical protein9e-21100