Pre_GI: BLASTP Hits

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Query: NC_004578:5336773:5399781 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 5399781, End: 5400563, Length: 783

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013410:89811:9739897398983991002Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein3e-31135
NC_015161:1556766:157013715701371570961825Deinococcus proteolyticus MRP chromosome, complete genomeserine/threonine phosphoprotein phosphatase5e-1168.2
NC_015674:1114915:1117668111766811199712304Helicobacter bizzozeronii CIII-1, complete genomehypothetical protein2e-1065.9
NC_009925:2533547:255183725518372552646810Acaryochloris marina MBIC11017, complete genomehypothetical protein1e-0860.5
NC_015573:1573621:157993715799371580728792Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeserine/threonine phosphoprotein phosphatase6e-0858.2
NC_014117:442616:473121473121473906786Burkholderia sp. CCGE1002 chromosome chromosome 1, completeserine/threonine phosphoprotein phosphatase7e-0857.8
NC_015376:2010009:202235220223522023119768Burkholderia gladioli BSR3 chromosome chromosome 2, completeserine/threonine phosphoprotein phosphatase1e-0757.4
NC_011884:1998559:200641320064132007243831Cyanothece sp. PCC 7425, complete genomeserine/threonine phosphoprotein phosphatase4e-0755.1
NC_011761:2546081:256026025602602561024765Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein6e-0754.7
NC_011206:2447905:246208424620842462848765Acidithiobacillus ferrooxidans ATCC 53993, complete genomehypothetical protein6e-0754.7
NC_013851:2317091:232631423263142327060747Allochromatium vinosum DSM 180 chromosome, complete genomeprotein serine/threonine phosphatase3e-0652.8