Pre_GI: BLASTP Hits

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Query: NC_004578:4432983:4446907 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4446907, End: 4447263, Length: 357

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:4630367:465760646576064657932327Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein8e-27119
NC_015590:298063:299163299163299510348Sinorhizobium meliloti AK83 chromosome 1, complete sequencehypothetical protein2e-1994.4
NC_011770:860944:903430903430903741312Pseudomonas aeruginosa LESB58, complete genomehypothetical protein5e-1063.2
NC_011770:1456667:147410314741031474402300Pseudomonas aeruginosa LESB58, complete genomehypothetical protein6e-0959.7
NC_011963:1482042:150370015037001504017318Rhodobacter sphaeroides KD131 chromosome 1, complete sequencehypothetical protein8e-0752.4
NC_007494:867901:891878891878892195318Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein8e-0752.4
NC_007493:207932:226940226940227257318Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencehypothetical protein2e-0650.8
NC_007493:628243:649109649109649426318Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencehypothetical protein3e-0650.4
NC_011963:3073283:308925930892593089576318Rhodobacter sphaeroides KD131 chromosome 1, complete sequencehypothetical protein4e-0650.1