Pre_GI: BLASTP Hits

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Query: NC_004578:1190000:1190965 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 1190965, End: 1191342, Length: 378

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:98488:114514114514114891378Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-32137
NC_013416:1091432:110177911017791102135357Aggregatibacter actinomycetemcomitans D11S-1, complete genomehypothetical protein4e-0960.1
NC_016513:1400899:141091914109191411275357Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completehypothetical protein4e-0960.1
NC_016809:389561:399454399454399810357Haemophilus influenzae 10810, complete genomehypothetical protein9e-0958.9
NC_002951:351029:360792360792361172381Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein2e-0754.3
NC_009632:2148767:216452721645272164907381Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein5e-0649.7
NC_009487:2148316:216465321646532165033381Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein5e-0649.7