Pre_GI: BLASTP Hits

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Query: NC_004578:1153738:1153738 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 1153738, End: 1154148, Length: 411

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:115390:117765117765118175411Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-66250
NC_009434:3611738:371058637105863710996411Pseudomonas stutzeri A1501, complete genomehypothetical protein1e-66250
NC_007507:101887:119094119094119513420Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,hypothetical protein5e-49192
NC_008752:3217695:323363032336303234049420Acidovorax avenae subsp. citrulli AAC00-1, complete genomePilT protein domain protein6e-49192
NC_008752:2936933:296969529696952970114420Acidovorax avenae subsp. citrulli AAC00-1, complete genomePilT protein domain protein6e-49192
NC_014722:1552454:155665315566531557072420Burkholderia rhizoxinica HKI 454, complete genomePIN domain3e-46183
NC_007644:626992:684568684568684987420Moorella thermoacetica ATCC 39073, complete genomeProtein of unknown function DUF1321e-0858.5
NC_009012:1934107:195160419516041952008405Clostridium thermocellum ATCC 27405, complete genomeProtein of unknown function DUF1322e-0651.6
NC_014410:800500:822057822057822461405Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,PilT protein domain protein4e-0650.1