Pre_GI: BLASTP Hits

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Query: NC_004547:913553:923068 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 923068, End: 925512, Length: 2445

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011740:448000:4555274555274579772451Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin, putative COG0542, putative COG1220, putative coiled coil01384
NC_004578:5192110:5201523520152352039822460Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein5e-151535
NC_013720:361785:3647273647273671472421Pirellula staleyi DSM 6068, complete genomehypothetical protein2e-64247
NC_013440:1317982:1327385132738513300872703Haliangium ochraceum DSM 14365, complete genomeprotein of unknown function DUF4501e-56222
NC_015663:770485:7777967777967802462451Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-42175
NC_010162:7824878:7835455783545578380432589Sorangium cellulosum 'So ce 56', complete genomehypothetical protein6e-40166
NC_006351:520500:5298685298685322912424Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein3e-36154
NC_011662:1:1190911909140442136Thauera sp. MZ1T, complete genomehypothetical protein3e-28127
NC_020453:7826358:7840706784070678432192514Agromonas oligotrophica S58 DNA, complete genomehypothetical protein4e-27124