Pre_GI: BLASTP Hits

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Query: NC_004547:843475:851563 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 851563, End: 852633, Length: 1071

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014562:3985500:3993096399309639941271032Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein ypfG precursor1e-75283
NC_021066:3703725:3708011370801137100982088Raoultella ornithinolytica B6, complete genomehypothetical protein6e-61234
NC_015663:1902344:1924474192447419265612088Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-60233
NC_013850:4993307:5020069502006950221562088Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF11763e-55215
NC_004460:1237129:1245983124598312469841002Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein3e-41169
NC_005140:1820970:1829772182977218308031032Vibrio vulnificus YJ016 chromosome II, complete sequenceputative regulatory protein4e-41169
NC_005085:1498000:150056415005641501562999Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-23110
NC_015761:2444833:2450761245076124518041044Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-0757