Pre_GI: BLASTP Hits

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Query: NC_004547:611178:631392 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 631392, End: 632048, Length: 657

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:3534378:353999135399913540647657Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-96351
NC_013892:1483000:149131714913171491973657Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-95348
NC_013892:3278647:330606333060633306719657Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-93339
NC_009832:4521585:454908745490874549758672Serratia proteamaculans 568, complete genomehypothetical protein3e-82304
NC_009708:4182460:418809741880974188750654Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-81300
NC_010554:2789722:282045428204542821098645Proteus mirabilis HI4320, complete genomehypothetical protein4e-80297
NC_015566:316340:336913336913337584672Serratia sp. AS12 chromosome, complete genomehypothetical protein5e-80296
NC_014029:331919:367298367298367969672Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-79295
NC_011992:1213726:123132712313271232019693Acidovorax ebreus TPSY, complete genomeputative secreted protein3e-61234
NC_015422:1876102:189739618973961898088693Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein7e-61233
NC_008344:49039:901319013190811681Nitrosomonas eutropha C91, complete genomeputative secreted protein8e-61233
NC_012912:483390:507092507092507772681Dickeya zeae Ech1591, complete genomeputative secreted protein2e-60231
NC_010170:1498253:153877915387791539471693Bordetella petrii, complete genomehypothetical protein2e-60231
NC_009138:1974935:202343620234362024125690Herminiimonas arsenicoxydans, complete genomehypothetical protein5e-60230
NC_011662:1041725:104405910440591044751693Thauera sp. MZ1T, complete genomehypothetical protein7e-60229
NC_011662:1017933:104405910440591044751693Thauera sp. MZ1T, complete genomehypothetical protein7e-60229
NC_012660:2045398:210744521074452108095651Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein2e-59228
NC_012691:2614603:266385626638562664536681Tolumonas auensis DSM 9187, complete genomeputative secreted protein4e-59227
NC_011901:2983555:299505029950502995718669Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein5e-59227
NC_012731:600518:605557605557606240684Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-58225
NC_016830:3869572:391514739151473915788642Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-57222
NC_015379:2417312:244532024453202446003684Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-57221
NC_006513:1379735:144125214412521441941690Azoarcus sp. EbN1, complete genomehypothetical protein1e-55216
NC_015726:2862500:288414228841422884831690Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein2e-54212
NC_021150:3667176:368823436882343688890657Azotobacter vinelandii CA6, complete genomehypothetical protein1e-53209
NC_012560:3667177:368823536882353688891657Azotobacter vinelandii DJ, complete genomehypothetical protein1e-53209
NC_004129:5373886:543179654317965432440645Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-53208
NC_004578:934867:934867934867935535669Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-53208
NC_007005:1636875:163621016362101636878669Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein7e-53206
NC_008463:5313527:533360453336045334263660Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein5e-46184
NC_009656:4527457:463785146378514638510660Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein8e-46183
NC_018080:5091772:516286251628625163521660Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein3e-45181
NC_015572:2186394:221947522194752220119645Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein5e-34144