Pre_GI: BLASTP Hits

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Query: NC_004547:611178:628306 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 628306, End: 629061, Length: 756

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009832:358291:379739379739380497759Serratia proteamaculans 568, complete genomehypothetical protein4e-78290
NC_015567:313035:334358334358335116759Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element membrane protein2e-77288
NC_015566:316340:334193334193334951759Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element membrane protein2e-77288
NC_014029:331919:365028365028365684657Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-66250
NC_014228:3391500:342500934250093425767759Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-64245
NC_005126:1223042:124931012493101250062753Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-64244
NC_013892:1483000:149426014942601495018759Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-63241
NC_013892:3278647:330214733021473302905759Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-63241
NC_009708:4182460:419473741947374195489753Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-51202
NC_014532:3555550:357942535794253580123699Halomonas elongata DSM 2581, complete genomehypothetical protein8e-33140
NC_004129:5373886:542770154277015428450750Pseudomonas fluorescens Pf-5, complete genomehypothetical protein7e-31134
NC_007005:1636875:164016416401641640913750Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein7e-30130
NC_008752:558828:569843569843570592750Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein7e-30130
NC_011662:1058794:105804810580481058797750Thauera sp. MZ1T, complete genomehypothetical protein7e-30130
NC_011662:1041725:105804810580481058797750Thauera sp. MZ1T, complete genomehypothetical protein7e-30130
NC_008825:2525380:254705825470582547807750Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-29129
NC_015422:1876102:187941418794141880163750Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element membrane protein2e-29129
NC_008782:2326439:234158523415852342334750Acidovorax sp. JS42, complete genomehypothetical protein3e-29128
NC_018080:5091772:515637851563785157124747Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-28127
NC_008463:5313527:532795353279535328603651Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein9e-29127
NC_006513:1379735:145619314561931456942750Azoarcus sp. EbN1, complete genomehypothetical protein5e-29127
NC_004578:934867:951854951854952603750Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-28126
NC_009656:4527457:463137046313704632116747Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-28126
NC_003919:2639080:264243026424302643179750Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein4e-28125
NC_011992:1234610:123461012346101235371762Acidovorax ebreus TPSY, complete genomehypothetical protein7e-28124
NC_010170:1498253:153599415359941536743750Bordetella petrii, complete genomehypothetical protein1e-26120
NC_009138:1974935:201550420155042016253750Herminiimonas arsenicoxydans, complete genomehypothetical protein7e-27120
NC_012912:483390:512527512527513276750Dickeya zeae Ech1591, complete genomehypothetical protein3e-26118
NC_011901:2983555:298625529862552987004750Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein4e-26118
NC_010002:4544818:456297945629794563740762Delftia acidovorans SPH-1, complete genomehypothetical protein8e-26117
NC_010170:4533416:453265845326584533419762Bordetella petrii, complete genomehypothetical protein8e-26117
NC_008344:49039:935309353094279750Nitrosomonas eutropha C91, complete genomehypothetical protein2e-25115
NC_012691:2614603:266018026601802660929750Tolumonas auensis DSM 9187, complete genomehypothetical protein6e-25114
NC_007484:667879:680571680571681302732Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein2e-23109
NC_020181:3328844:334830633483063348989684Enterobacter aerogenes EA1509E, complete genomehypothetical protein5e-1891.7
NC_015379:2417312:244803424480342448783750Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein7e-1890.9
NC_016830:3869572:391994739199473920381435Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein8e-1580.9
NC_016830:3869572:392280539228053923116312Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein5e-1064.7
NC_012731:600518:614926614926615558633Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-0858.2