Pre_GI: BLASTP Hits

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Query: NC_004547:611178:624021 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 624021, End: 624608, Length: 588

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014029:331919:360482360482361174693Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-54210
NC_015566:316340:330295330295330981687Serratia sp. AS12 chromosome, complete genomelytic transglycosylase catalytic subunit8e-54209
NC_015567:313035:330460330460331146687Serratia sp. AS9 chromosome, complete genomelytic transglycosylase catalytic subunit8e-54209
NC_009832:358291:375841375841376533693Serratia proteamaculans 568, complete genomeLytic transglycosylase catalytic2e-53208
NC_016845:4539381:454202745420274542596570Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein4e-47187
NC_009708:4182460:419818641981864198824639Yersinia pseudotuberculosis IP 31758 chromosome, complete genometransglycosylase4e-46184
NC_020181:3328844:334511033451103345643534Enterobacter aerogenes EA1509E, complete genomeFIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)6e-33140
NC_011901:2983555:298297429829742983558585Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completelytic transglycosylase1e-32139
NC_010170:1498253:153267115326711533261591Bordetella petrii, complete genomeconserved exported protein2e-31135
NC_011992:1234610:123678112367811237371591Acidovorax ebreus TPSY, complete genomeLytic transglycosylase catalytic8e-31133
NC_010002:4544818:455964445596444560249606Delftia acidovorans SPH-1, complete genomeLytic transglycosylase catalytic2e-30132
NC_010170:4533416:453615045361504536755606Bordetella petrii, complete genomeconserved exported protein2e-30132
NC_004129:5373886:542417254241725424723552Pseudomonas fluorescens Pf-5, complete genomehypothetical protein4e-30130
NC_014532:3555550:357369035736903574481792Halomonas elongata DSM 2581, complete genomelytic transglycosylase, catalytic4e-30130
NC_012731:600518:617570617570618088519Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein8e-30130
NC_008825:2525380:254374625437462544366621Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-29129
NC_009138:1974935:201218120121812012771591Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide2e-29128
NC_007005:1636875:164362716436271644184558Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein3e-29128
NC_011662:1058794:106148910614891062109621Thauera sp. MZ1T, complete genomeLytic transglycosylase catalytic4e-29127
NC_008782:2326439:234502623450262345646621Acidovorax sp. JS42, complete genomeLytic transglycosylase, catalytic4e-29127
NC_008752:558828:573364573364573972609Acidovorax avenae subsp. citrulli AAC00-1, complete genomeLytic transglycosylase, catalytic2e-28125
NC_006513:1379735:145965414596541460235582Azoarcus sp. EbN1, complete genomehypothetical protein2e-28125
NC_003919:2639080:263908026390802639691612Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein6e-28123
NC_015422:1876102:187610218761021876722621Alicycliphilus denitrificans K601 chromosome, complete genomelytic transglycosylase catalytic subunit6e-28123
NC_012912:483390:515976515976516566591Dickeya zeae Ech1591, complete genomeputative signal peptide7e-28123
NC_012691:2614603:265685726568572657447591Tolumonas auensis DSM 9187, complete genomeLytic transglycosylase catalytic1e-27122
NC_009656:4527457:462777946277794628360582Pseudomonas aeruginosa PA7 chromosome, complete genomesoluble lytic murein transglycosylase4e-26117
NC_018080:5091772:515278751527875153368582Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein9e-26116
NC_013716:3512950:354301235430123543440429Citrobacter rodentium ICC168, complete genome1e-25115
NC_007484:667879:677299677299677862564Nitrosococcus oceani ATCC 19707, complete genomeLytic transglycosylase, catalytic1e-24112
NC_008344:49039:969949699497584591Nitrosomonas eutropha C91, complete genomeLytic transglycosylase, catalytic1e-23109
NC_016830:3869572:392583039258303926225396Pseudomonas fluorescens F113 chromosome, complete genomeSoluble lytic murein transglycosylase subunit9e-22103
NC_015572:2186394:219838421983842198950567Methylomonas methanica MC09 chromosome, complete genomelytic transglycosylase catalytic subunit2e-21102
NC_010554:2646806:265392226539222654470549Proteus mirabilis HI4320, complete genomephage transglycosylase3e-1271.6
NC_015850:2048251:208841620884162089186771Acidithiobacillus caldus SM-1 chromosome, complete genomemembrane bound transglycosylase family protein9e-1270.1
NC_017062:547317:569324569324570112789Rickettsia typhi str. B9991CWPP chromosome, complete genomehypothetical protein2e-1168.9
NC_010125:1651687:167257916725791673541963Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transglycosylase5e-1064.3
NC_007626:2354260:239560523956052396444840Magnetospirillum magneticum AMB-1, complete genomeSoluble lytic murein transglycosylase and related regulatory protein4e-0857.8