Pre_GI: BLASTP Hits

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Query: NC_004547:1970686:1987044 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1987044, End: 1987559, Length: 516

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:2921932:292747729274772927992516Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeprotein FliZ4e-95346
NC_012880:1765920:184202218420221842534513Dickeya dadantii Ech703, complete genomeprotein FliZ3e-77286
NC_013592:1730505:174986617498661750378513Dickeya dadantii Ech586, complete genomeprotein FliZ1e-70265
NC_014500:3023762:303470530347053035217513Dickeya dadantii 3937 chromosome, complete genomeputative regulator of FliA activity2e-69260
NC_012912:1788308:181120518112051811717513Dickeya zeae Ech1591, complete genomeprotein FliZ3e-68256
NC_015224:2017781:203984320398432040352510Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagella biosynthesis protein FliZ1e-58225
NC_008800:2695977:271342927134292713938510Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagella biosynthesis protein FliZ1e-58225
NC_016816:1912366:194503419450341945537504Pantoea ananatis LMG 5342, complete genomeflagellar biosynthesis protein FliZ2e-50197
NC_013956:2523955:252395525239552524458504Pantoea ananatis LMG 20103 chromosome, complete genomeFliZ2e-50197
NC_012779:2281700:229819922981992298717519Edwardsiella ictaluri 93-146, complete genomeintegrase domain protein SAM domain protein6e-39159
NC_016514:2950860:295846529584652959016552Enterobacter cloacae EcWSU1 chromosome, complete genomefliZ3e-37154
NC_009436:2685910:270537527053752705926552Enterobacter sp. 638, complete genomeflagella biosynthesis protein FliZ2e-36151