Pre_GI: BLASTP Hits

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Query: NC_004547:1970686:1984841 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1984841, End: 1985590, Length: 750

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:2921932:293073729307372931477741Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMethyltransferase type 123e-136484
NC_015138:4905935:491681749168174917551735Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetype 12 methyltransferase3e-36152
NC_002939:3303989:331187933118793312637759Geobacter sulfurreducens PCA, complete genomehypothetical protein3e-32138
NC_000911:352263:363433363433364218786Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-20100
NC_017039:352263:363433363433364218786Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-20100
NC_017052:352251:363421363421364206786Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-20100
NC_017277:352263:363433363433364218786Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-20100
NC_007796:3379614:339194733919473392687741Methanospirillum hungatei JF-1, complete genomeMethyltransferase type 123e-1995.1
NC_007575:192095:195165195165195890726Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein4e-1995.1
NC_012881:4023895:403086340308634031588726Desulfovibrio salexigens DSM 2638, complete genomeMethyltransferase type 125e-1994.7
NC_016112:3103716:313481531348153135546732Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein5e-1374.7
NC_009483:3544333:355358235535823554580999Geobacter uraniireducens Rf4 chromosome, complete genometype 12 methyltransferase3e-0858.9
NC_003552:4637764:4648379464837946504032025Methanosarcina acetivorans C2A, complete genomehypothetical protein4e-0755.1