Pre_GI: BLASTP Hits

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Query: NC_004547:1174650:1192861 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1192861, End: 1193283, Length: 423

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:2791719:281012728101272810447321Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-23106
NC_009792:3665369:368471036847103684973264Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-1993.6
NC_010067:191190:205755205755206069315Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1582
NC_011741:4570498:458669745866974587011315Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-1168.9
CU928160:4570498:458669745866974587011315Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein1e-1168.9
NC_009801:2898426:292620229262022926390189Escherichia coli E24377A, complete genomeputative lipoprotein7e-0855.8
NC_012917:1840172:185952018595201859843324Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein3e-0650.4
NC_013421:1819036:185876418587641859087324Pectobacterium wasabiae WPP163, complete genomehypothetical protein6e-0649.7