Pre_GI: BLASTP Hits

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Query: NC_004547:1174650:1176745 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1176745, End: 1177299, Length: 555

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:4168189:418775941877594188307549Serratia marcescens WW4, complete genomehypothetical protein2e-81301
NC_012880:3421500:344980834498083450362555Dickeya dadantii Ech703, complete genomeYaeQ family protein9e-78289
NC_008740:443274:510442510442510987546Marinobacter aquaeolei VT8, complete genomeYaeQ family protein2e-50198
NC_009074:94000:111594111594112148555Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein7e-43173
NC_009076:106807:124839124839125393555Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein7e-43173
NC_020911:1859210:186288018628801863425546Octadecabacter antarcticus 307, complete genomehypothetical protein1e-42172
NC_007651:72952:878808788088635756Burkholderia thailandensis E264 chromosome I, complete sequenceYaeQ protein family5e-42170
NC_015422:4822636:482263648226364823196561Alicycliphilus denitrificans K601 chromosome, complete genomeYaeQ family protein1e-36152
NC_015563:6357653:637871963787196379279561Delftia sp. Cs1-4 chromosome, complete genomeYaeQ family protein2e-36151
NC_010002:960027:961131961131961691561Delftia acidovorans SPH-1, complete genomeYaeQ family protein2e-36151
NC_015677:3965716:396957839695783970138561Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein3e-35147
NC_011992:3615517:361770636177063618266561Acidovorax ebreus TPSY, complete genomeYaeQ family protein6e-35146
NC_008752:5213431:521556852155685216128561Acidovorax avenae subsp. citrulli AAC00-1, complete genomeYaeQ family protein4e-34144
NC_015138:5276857:527823952782395278799561Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeYaeQ family protein6e-34143
NC_007498:2638671:265382426538242654360537Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein9e-31132
NC_017387:1110412:113010811301081130638531Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomehypothetical protein9e-30129
NC_008146:2744612:276096927609692761520552Mycobacterium sp. MCS, complete genomeYaeQ4e-25114
NC_008705:2763131:277885727788572779408552Mycobacterium sp. KMS, complete genomeYaeQ family protein4e-25114
NC_009338:3410349:342373834237383424289552Mycobacterium gilvum PYR-GCK chromosome, complete genomeYaeQ family protein4e-25114
NC_007492:1193626:119841411984141198956543Pseudomonas fluorescens PfO-1, complete genomeYaeQ4e-25114
NC_014814:2588628:263949626394962640047552Mycobacterium sp. Spyr1 chromosome, complete genomeprotein conserved in bacteria3e-25114
NC_008596:3404832:343224434322443432795552Mycobacterium smegmatis str. MC2 155, complete genomeYaeQ protein2e-24112