Pre_GI: BLASTP Hits

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Query: NC_004463:8401060:8407719 Bradyrhizobium japonicum USDA 110, complete genome

Start: 8407719, End: 8409461, Length: 1743

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016812:463000:4663394663394681021764Sinorhizobium fredii HH103, complete genomeadenylate cyclase7e-99361
NC_011894:79282:1002011002011021441944Methylobacterium nodulans ORS 2060, complete genomeadenylate/guanylate cyclase4e-90332
NC_011894:79282:9341593415953581944Methylobacterium nodulans ORS 2060, complete genomeadenylate/guanylate cyclase1e-89331
NC_007761:1097531:1101628110162811032801653Rhizobium etli CFN 42, complete genomeadenylate cyclase protein3e-83310
NC_010511:3106418:3130007313000731319531947Methylobacterium sp. 4-46 chromosome, complete genomeTPR repeat-containing adenylate/guanylate cyclase1e-82307
NC_010505:4990472:5003651500365150056271977Methylobacterium radiotolerans JCM 2831, complete genomeadenylate/guanylate cyclase with TPR repeats3e-45183
NC_004463:7683426:7693168769316876951441977Bradyrhizobium japonicum USDA 110, complete genomeputative adenylate cyclase 39e-42172
NC_004463:8401060:8442362844236284435431182Bradyrhizobium japonicum USDA 110, complete genomeputative adenylate cyclase1e-41171
NC_017249:4398000:4413965441396544155271563Bradyrhizobium japonicum USDA 6, complete genomeadenylate cyclase4e-41169
NC_003910:3448983:3461246346124634633062061Colwellia psychrerythraea 34H, complete genomeputative adenylate cyclase9e-37155
NC_014307:233045:2657302657302674841755Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein9e-32138
NC_005125:1161000:1175412117541211781532742Gloeobacter violaceus PCC 7421, complete genomeserine/threonine protein kinase6e-28125
NC_010511:6485500:6494754649475464959801227Methylobacterium sp. 4-46 chromosome, complete genomeputative adenylate cyclase 32e-25117
NC_013222:432947:4469564469564490762121Robiginitalea biformata HTCC2501, complete genomeserine/threonine kinase5e-25116
NC_009445:1316000:1337196133719613389261731Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein2e-23110
NC_015732:2880801:2904791290479129071032313Spirochaeta caldaria DSM 7334 chromosome, complete genomeadenylate/guanylate cyclase2e-23110
NC_007722:55558:7282572825747891965Erythrobacter litoralis HTCC2594, complete genomeputative adenylate cyclase protein2e-1894.4
NC_017249:60216:7104371043726741632Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-1480.9
NC_009380:1885024:1890396189039618921291734Salinispora tropica CNB-440 chromosome, complete genomeadenylyl cyclase class-3/4/guanylyl cyclase4e-1273.6
NC_017082:5925357:593954159395415940338798Bradyrhizobium sp. S23321, complete genomehypothetical protein5e-1169.7
NC_014168:3013697:3013697301369730148121116Segniliparus rotundus DSM 44985 chromosome, complete genomeadenylate/guanylate cyclase7e-1169.3
NC_014150:2617072:2628740262874026297981059Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein1e-1068.6
NC_013851:2441407:244518524451852446135951Allochromatium vinosum DSM 180 chromosome, complete genomeadenylate/guanylate cyclase1e-1068.6
NC_012225:2834642:2847047284704728484081362Brachyspira hyodysenteriae WA1, complete genomeTPR domain-containing protein1e-1068.6
NC_012586:922095:948906948906949295390Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence2e-1068.2
NC_007645:3434795:345605534560553456951897Hahella chejuensis KCTC 2396, complete genomeAdenylate cyclase, family 33e-1067
NC_012225:2834642:2844286284428628467392454Brachyspira hyodysenteriae WA1, complete genomeputative TPR domain-containing protein5e-1066.6
NC_010511:637214:6417186417186448883171Methylobacterium sp. 4-46 chromosome, complete genomepeptidase C14 caspase catalytic subunit p205e-1066.6
NC_019977:1245894:1262204126220412649452742Methanomethylovorans hollandica DSM 15978, complete genomeputative endonuclease related to Holliday junction resolvase1e-0965.5
NC_012586:922095:949259949259949504246Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence1e-0965.5
NC_008312:3728329:3728329372832937319523624Trichodesmium erythraeum IMS101, complete genomeadenylate/guanylate cyclase2e-0964.7
NC_003454:249304:2679022679022697881887Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTetratricopeptide repeat family protein2e-0964.7
NC_008312:2264832:2264832226483222700455214Trichodesmium erythraeum IMS101, complete genomeglycosyl transferase, family 22e-0964.3
NC_013441:2788806:281594528159452816625681Gordonia bronchialis DSM 43247, complete genomeadenylyl cyclase class-3/4/guanylyl cyclase2e-0964.3
NC_012225:2834642:2842390284239028442431854Brachyspira hyodysenteriae WA1, complete genomehypothetical protein5e-0963.5
NC_015416:2926236:294481129448112945602792Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein5e-0963.2
NC_008595:1176658:119346911934691194287819Mycobacterium avium 104, complete genomeadenylate and Guanylate cyclase catalytic domain protein5e-0963.2
NC_008789:2057368:2074161207416120760981938Halorhodospira halophila SL1, complete genomeputative adenylate/guanylate cyclase6e-0962.8
NC_005071:288922:3365573365573397303174Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat7e-0962.8
NC_000916:31459:4322743227444381212Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase8e-0962.4
NC_011894:2549076:2561841256184125649093069Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p201e-0862
NC_011729:1496848:1496848149684815006783831Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein1e-0862
NC_014150:2617072:2624435262443526262881854Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein1e-0861.6
NC_010511:1691753:1703437170343717044891053Methylobacterium sp. 4-46 chromosome, complete genomeadenylate/guanylate cyclase2e-0861.6
NC_014150:2617072:2626326262632626285782253Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein2e-0861.2
NC_008312:1067500:1079303107930310827043402Trichodesmium erythraeum IMS101, complete genomeadenylate/guanylate cyclase4e-0860.5
NC_008312:1067500:1082962108296210863543393Trichodesmium erythraeum IMS101, complete genomeadenylate/guanylate cyclase4e-0860.1
NC_014408:1018448:1026328102632810275481221Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein4e-0860.1
NC_019908:2183215:2187826218782621906032778Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein4e-0860.1
NC_011894:79282:8311183111845261416Methylobacterium nodulans ORS 2060, complete genomeadenylate/guanylate cyclase7e-0859.7
NC_008312:2511500:2521887252188725236711785Trichodesmium erythraeum IMS101, complete genomeTPR repeat6e-0859.7
NC_014408:1455851:1466636146663614677961161Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein6e-0859.7
NC_000916:31459:5142651426525651140Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase6e-0859.7
NC_018607:895204:910760910760911716957Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein7e-0859.3
NC_011894:7421867:7434437743443774374032967Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p208e-0859.3
NC_008312:2264832:2281661228166122831211461Trichodesmium erythraeum IMS101, complete genomeTPR repeat8e-0859.3
NC_000916:31459:415174151742203687Methanothermobacter thermautotrophicus str. Delta H, completeTPR-repeat-containing protein9e-0859.3
NC_011894:6295807:6299486629948663026563171Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p202e-0757.8
NC_015416:2967511:2971720297172029729821263Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein2e-0757.8
NC_017082:6444522:6444522644452264460841563Bradyrhizobium sp. S23321, complete genomeputative adenylate/guanylate cyclase3e-0757.4
NC_015065:162317:1967831967831983481566Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceTetratricopeptide TPR_1 repeat-containing protein4e-0757
NC_008820:2512518:2522419252241925245392121Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein4e-0757
NC_003047:2477810:2478043247804324798691827Sinorhizobium meliloti 1021, complete genomehypothetical protein4e-0756.6
NC_015590:2290359:2290592229059222924181827Sinorhizobium meliloti AK83 chromosome 1, complete sequenceSARP family transcriptional regulator4e-0756.6
NC_017322:2191391:2191624219162421934501827Sinorhizobium meliloti BL225C chromosome, complete genomeSARP family transcriptional regulator4e-0756.6
NC_017325:967598:9894329894329912581827Sinorhizobium meliloti SM11 chromosome, complete genomehypothetical protein4e-0756.6
NC_012440:1841315:1861196186119618622331038Persephonella marina EX-H1, complete genomeTPR Domain containing protein8e-0755.8
NC_007677:3316540:3338786333878633404501665Salinibacter ruber DSM 13855, complete genomeTPR repeat protein8e-0755.8
NC_013851:2211120:2230538223053822329342397Allochromatium vinosum DSM 180 chromosome, complete genomeMethyltransferase type 119e-0755.8
NC_008781:2108893:211957721195772120503927Polaromonas naphthalenivorans CJ2, complete genomeputative adenylate/guanylate cyclase1e-0655.5
NC_017082:532000:5760965760965795273432Bradyrhizobium sp. S23321, complete genomeputative adenylate cyclase1e-0655.5
NC_011894:2503639:2517451251745125199072457Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p201e-0655.5
NC_009077:4747922:4760193476019347614701278Mycobacterium sp. JLS, complete genomeputative adenylate/guanylate cyclase2e-0654.7
NC_016948:419500:4435584435584451111554Mycobacterium intracellulare MOTT-64 chromosome, complete genomeadenylate cyclase, family protein 33e-0653.9
NC_011894:3029964:3038773303877330411272355Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p204e-0653.5
NC_015388:2499187:2499187249918725014392253Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeadenylate/guanylate cyclase with Chase sensor4e-0653.5
NC_004463:2475428:2477926247792624795091584Bradyrhizobium japonicum USDA 110, complete genometwo-component hybrid sensor and regulator5e-0653.1
NC_017904:4203257:4213445421344542149711527Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein9e-0652.4