Pre_GI: BLASTP Hits

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Query: NC_004432:936500:946265 Mycoplasma penetrans HF-2, complete genome

Start: 946265, End: 946957, Length: 693

Host Lineage: Mycoplasma penetrans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: This strain has been isolated from the tracheal aspirate of a previously healthy HIV-negative patient with severe respiratory symptoms caused by this infection. Causes urogenital and respiratory disease. This genus currently comprises more than 120 obligate parasitic species found in a wide spectrum of hosts, including humans, animals, insects and plants. The primary habitats of human and animal mycoplasmas are mucous membranes of the respiratory and urogenital tracts, eyes, mammary glands and the joints. Infection that proceeds through attachment of the bacteria to the host cell via specialized surface proteins, adhesins, and subsequent invasion, results in prolonged intracellular persistence that may cause lethality. Once detected in association with their eukaryotic host tissue, most mycoplasmas can be cultivated in the absence of a host if their extremely fastidious growth requirements are met. The latter is one of the major traits that puts them in the separate taxonomic group of microorganisms, class Mollicutes. The cell membrane is rich in protein components (up to two thirds of the membrane mass) that largely consists of highly structurally adaptive lipoproteins employed in invading the host immune system, attachment to the host cells, and pathogenic invasion. Cell division proceeds via normal binary fission or via elongation of a parental cell to form multinucleated filaments and the subsequent breakup to form coccoid bodies.Mycoplasmas carry the smallest genomes of self-replicating cells (less than 500 recognizable coding regions), which is one of the reasons they were among the first microorganisms selected for the genome-sequencing projects. During their evolution, mycoplasmas appear to have lost all of the genes involved in amino acid and cofactor biosynthesis, synthesis of the cell wall and lipid metabolism, resulting in a requirement for the full spectrum of substrates and cofactors taken up from the host or from the complex artificial culture medium. They have lost a number of genes involved in cellular processes, such as cell division, heat shock response, regulatory genes, the two-component signal transduction systems, histidine protein kinases or their target response regulators, and most transcription factors. The majority of mycoplasmas are deficient in genes coding for components of intermediary and energy metabolism and thus are dependent mostly on glycolysis as an ATP-generating pathway. This organism infects humans in the urogenital and respiratory tracts though invasion of tissues. The disease is mainly associated with HIV-1 infection, particularly in the homosexual population, and is very persistent and believed to contribute to the deterioration of the immune system during HIV. Mycoplasma penetrans infection has also been suggested to be a primary cause of some forms of human urethritis and respiratory disease in non-HIV individuals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014921:22828:2563325633266941062Mycoplasma fermentans M64 chromosome, complete genomehypothetical protein4e-90330
NC_006085:925604:956567956567957559993Propionibacterium acnes KPA171202, complete genomeputative phosphotriesterase3e-35148
NC_008578:591357:600457600457601455999Acidothermus cellulolyticus 11B, complete genomearyldialkylphosphatase9e-25113
NC_014915:2092678:212382321238232124815993Geobacillus sp. Y412MC52 chromosome, complete genomearyldialkylphosphatase5e-1994.4
NC_013411:2975364:298389229838922984884993Geobacillus sp. Y412MC61, complete genomearyldialkylphosphatase5e-1994.4
NC_014831:2133060:216311321631132164108996Thermaerobacter marianensis DSM 12885 chromosome, complete genomeAryldialkylphosphatase1e-1479.7
NC_014363:8228:203462034621254909Olsenella uli DSM 7084 chromosome, complete genomearyldialkylphosphatase3e-1272
NC_013198:394000:425426425426426310885Lactobacillus rhamnosus GG, complete genomemetal-dependent hydrolase with the TIM-barrel fold6e-1064.3
NC_011295:33500:335943359434484891Coprothermobacter proteolyticus DSM 5265, complete genomeputative phosphotriesterase7e-1064.3
NC_013892:114884:1358911358911369791089Xenorhabdus bovienii SS-2004 chromosome, complete genomephosphotriesterase with metallo-dependent hydrolase domain6e-0857.8