Pre_GI: BLASTP Hits

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Query: NC_004347:4211241:4225087 Shewanella oneidensis MR-1, complete genome

Start: 4225087, End: 4225800, Length: 714

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009665:593359:595195595195595908714Shewanella baltica OS185 chromosome, complete genomehypothetical protein7e-105379
NC_009052:4437649:445879544587954459508714Shewanella baltica OS155, complete genomeprotein of unknown function DUF5417e-105379
NC_012668:83641:106143106143106859717Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein4e-40164
NC_015424:2695847:269825526982552698977723Aeromonas veronii B565 chromosome, complete genomehypothetical protein2e-26119
NC_015224:889536:903519903519904274756Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-24112
NC_008700:3927896:393930539393053940057753Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein2e-1686.3
NC_012587:2326000:234546423454642346249786Rhizobium sp. NGR234, complete genomeputative outer membrane protein2e-1375.9
NC_014923:2439197:244371524437152444428714Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeprotein of unknown function DUF5413e-1272
NC_008095:8772893:879038187903818791127747Myxococcus xanthus DK 1622, complete genomeputative 28 kDa outer membrane protein9e-1270.5
NC_017322:2191391:221101822110182211806789Sinorhizobium meliloti BL225C chromosome, complete genomehypothetical protein1e-1170.1
NC_003047:2477810:249742624974262498214789Sinorhizobium meliloti 1021, complete genomehypothetical protein1e-1170.1
NC_015675:2567000:257087125708712571581711Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein1e-1169.7
NC_013520:571647:577816577816578547732Veillonella parvula DSM 2008, complete genomeprotein of unknown function DUF5412e-1169.3
NC_019973:2417000:242088124208812421591711Mesorhizobium australicum WSM2073, complete genomehypothetical protein2e-1169.3
NC_011963:742158:745198745198745890693Rhodobacter sphaeroides KD131 chromosome 1, complete sequencehypothetical protein1e-1067
NC_009049:1125681:113076411307641131456693Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceprotein of unknown function DUF5412e-1065.9
NC_014221:2392150:241329924132992414021723Truepera radiovictrix DSM 17093 chromosome, complete genomeprotein of unknown function DUF5417e-1064.3
NC_013722:2919560:292575229257522926486735Xanthomonas albilineans, complete genomehypothetical protein2e-0963.2
NC_008639:2460033:248289024828902483618729Chlorobium phaeobacteroides DSM 266, complete genomeprotein of unknown function DUF5412e-0859.7
NC_020291:2701149:271358027135802714257678Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein4e-0858.2
NC_014483:195321:213616213616214377762Paenibacillus polymyxa E681 chromosome, complete genomeOuter membrane protein, 28 kDa5e-0858.2
NC_014960:3375807:338331733833173384042726Anaerolinea thermophila UNI-1, complete genomehypothetical protein9e-0857.4
NC_021177:1736854:175518417551841755918735Streptomyces fulvissimus DSM 40593, complete genomeSIMPL domain containing protein3e-0652.4