Pre_GI: BLASTP Hits

Some Help

Query: NC_004347:4007847:4017027 Shewanella oneidensis MR-1, complete genome

Start: 4017027, End: 4017638, Length: 612

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:3627438:363089736308973631565669Escherichia coli ED1a chromosome, complete genomeThiol:disulfide interchange protein dsbA2e-35149
NC_012918:1660477:169153916915391692201663Geobacter sp. M21 chromosome, complete genomeDSBA oxidoreductase2e-34145
NC_009802:1977596:199270519927051993361657Campylobacter concisus 13826, complete genomeintegrase/recombinase6e-32137
NC_014618:1040381:104546710454671046090624Enterobacter cloacae SCF1 chromosome, complete genomeDSBA oxidoreductase5e-1787.4
NC_009092:261778:283924283924284535612Shewanella loihica PV-4, complete genomeDSBA oxidoreductase5e-1580.9
NC_016513:317197:337725337725338342618Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completethiol:disulfide interchange protein DsbA2e-1375.5
NC_012913:1867276:186727618672761867893618Aggregatibacter aphrophilus NJ8700, complete genomethiol:disulfide interchange protein DsbA8e-1167
NC_011294:4560902:457672845767284577381654Salmonella enterica subsp. enterica serovar Enteritidis strThiol:disulfide interchange protein3e-1065.5
NC_011147:4460726:447439844743984475063666Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-1065.1
NC_006511:4465495:447916844791684479833666Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-1065.1
NC_016831:4517850:453387545338754534528654Salmonella enterica subsp. enterica serovar Gallinarum/pullorumThiol:disulfide interchange protein7e-1063.9
NC_011274:4538722:455454645545464555199654Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91Thiol:disulfide interchange protein7e-1063.9
NC_011205:4718239:473406547340654734718654Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein7e-1063.9
NC_013971:2876733:288418528841852884832648Erwinia amylovora ATCC 49946 chromosome, complete genomethiol:disulfide interchange protein2e-0652.4
NC_010694:2971170:297878329787832979430648Erwinia tasmaniensis, complete genomeThiol:disulfide interchange protein DsbA3e-0652