Pre_GI: BLASTP Hits

Some Help

Query: NC_004347:103967:113272 Shewanella oneidensis MR-1, complete genome

Start: 113272, End: 114180, Length: 909

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008577:2511326:251132625113262512225900Shewanella sp. ANA-3 chromosome 1, complete sequenceformate dehydrogenase accessory protein FdhE1e-96353
NC_010067:3538169:356127735612773562206930Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-43174
NC_012721:1052883:105288310528831053818936Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-30133
NC_007650:832507:832507832507833469963Burkholderia thailandensis E264 chromosome II, complete sequenceformate dehydrogenase accessory protein FdhE6e-29128
NC_010322:583842:612066612066612986921Pseudomonas putida GB-1 chromosome, complete genomeformate dehydrogenase accessory protein FdhE1e-27124
NC_015856:940625:963238963238964224987Collimonas fungivorans Ter331 chromosome, complete genomeformate dehydrogenase formation protein8e-27121
NC_014932:1232346:130802313080231308934912Bartonella clarridgeiae 73, complete genomehypothetical protein3e-1582.8
NC_000918:707801:725987725987726838852Aquifex aeolicus VF5, complete genomeformate dehydrogenase formation protein FdhE5e-1478.6
NC_015589:3053504:307642330764233077238816Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeformate dehydrogenase accessory protein1e-1170.5
NC_011891:2088134:210172421017242102554831Anaeromyxobacter dehalogenans 2CP-1, complete genomeformate dehydrogenase accessory protein7e-0961.6
NC_007517:1107408:111854711185471119389843Geobacter metallireducens GS-15, complete genomeformate dehydrogenase formation protein FdhE, putative3e-0859.3