Pre_GI: BLASTP Hits

Some Help

Query: NC_004337:3590323:3724307 Shigella flexneri 2a str. 301, complete genome

Start: 3724307, End: 3725305, Length: 999

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010939:1809446:182399918239991824997999Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete2,3-diketo-L-gulonate reductase9e-151533
NC_009053:1785447:180011118001111800818708Actinobacillus pleuropneumoniae L20, complete genome2,3-diketo-L-gulonate reductase1e-107389
NC_010278:1749579:176083717608371761511675Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,malate/L-lactate dehydrogenase4e-103374
NC_015177:3195249:319665131966513197640990Pedobacter saltans DSM 12145 chromosome, complete genomeMalate/L-lactate dehydrogenase1e-81303
NC_010278:1749579:176149817614981761836339Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,malate/L-lactate dehydrogenase3e-32139
NC_009342:841500:8636508636508646931044Corynebacterium glutamicum R chromosome, complete genomehypothetical protein4e-31135
NC_013421:2306000:2319960231996023210271068Pectobacterium wasabiae WPP163, complete genomeMalate/L-lactate dehydrogenase2e-30132
NC_002928:3781657:3793280379328037943081029Bordetella parapertussis 12822, complete genomeputative dehydrogenase1e-28127
NC_015499:1466794:1468477146847714695351059Thermodesulfobium narugense DSM 14796 chromosome, complete genomeMalate dehydrogenase5e-28125
NC_013205:747502:7706477706477717081062Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,(R)-2-hydroxyacid dehydrogenase2e-27123
NC_014377:1897857:1907118190711819081671050Thermosediminibacter oceani DSM 16646 chromosome, complete genomeMalate/L-lactate dehydrogenase4e-27122
NC_013440:8405719:8427442842744284285091068Haliangium ochraceum DSM 14365, complete genomeMalate/L-lactate dehydrogenase5e-27122
NC_014364:2717865:2739872273987227409001029Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeMalate/L-lactate dehydrogenase6e-27121
NC_004193:2921103:2929805292980529308751071Oceanobacillus iheyensis HTE831, complete genomemalate dehydrogenase1e-26120
NC_015145:92397:1189271189271199671041Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomemalate/lactate dehydrogenase3e-26119
NC_012984:2709148:2710909271090927119971089Lactobacillus plantarum JDM1, complete genomemalate dehydrogenase (putative)8e-26117
NC_014408:1455851:1456878145687814579031026Methanothermobacter marburgensis str. Marburg chromosome, completesulfolactate dehydrogenase5e-25115
NC_013730:296312:3138193138193148861068Spirosoma linguale DSM 74, complete genomeMalate/L-lactate dehydrogenase9e-25114
NC_015677:1282865:1283832128383212848991068Ramlibacter tataouinensis TTB310 chromosome, complete genomemalate dehydrogenase4e-24112
NC_020211:2206500:2218228221822822193161089Serratia marcescens WW4, complete genomeputative dehydrogenase3e-24112
NC_015458:1692401:1702653170265317037081056Pusillimonas sp. T7-7 chromosome, complete genomemalate dehydrogenase7e-24111
NC_011894:3797500:379933637993363800325990Methylobacterium nodulans ORS 2060, complete genomeMalate/L-lactate dehydrogenase1e-23110
NC_015727:1050500:1058631105863110596981068Cupriavidus necator N-1 plasmid BB1p, complete sequencemalate dehydrogenase1e-22107
NC_020181:1653261:1653261165326116543521092Enterobacter aerogenes EA1509E, complete genomeMalate dehydrogenase3e-22106
NC_015663:3742738:3763894376389437649851092Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative dehydrogenase5e-22105
NC_019908:1886647:190455819045581905556999Brachyspira pilosicoli P43/6/78 chromosome, complete genomeureidoglycolate dehydrogenase1e-21103
NC_004129:2440744:2458384245838424594301047Pseudomonas fluorescens Pf-5, complete genomemalate/L-lactate dehydrogenase family protein1e-21103
NC_014217:4550544:4584948458494845860181071Starkeya novella DSM 506 chromosome, complete genomeMalate/L-lactate dehydrogenase6e-21101
NC_006322:1119471:1132344113234411333721029Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1894.4
NC_006270:1119000:1131490113149011325181029Bacillus licheniformis ATCC 14580, complete genomeputative Ureidoglycolate dehydrogenase1e-1894.4
NC_006270:1119000:1132542113254211335911050Bacillus licheniformis ATCC 14580, complete genomeputative ureidoglycolate dehydrogenase2e-1893.6
NC_006322:1119471:1133396113339611344451050Bacillus licheniformis ATCC 14580, complete genomeYjmC2e-1893.6
NC_015723:961909:9637819637819649321152Cupriavidus necator N-1 chromosome 2, complete sequencemalate/L-lactate dehydrogenase3e-1892.8
NC_010170:1324758:1324758132475813257921035Bordetella petrii, complete genomeMalate dehydrogenase2e-1686.7
NC_009440:1045882:105227010522701053256987Metallosphaera sedula DSM 5348 chromosome, complete genomeL-sulfolactate dehydrogenase/malate dehydrogenase (NAD)9e-1684.7
NC_015723:430165:4467754467754478211047Cupriavidus necator N-1 chromosome 2, complete sequenceBll6274 protein3e-1376.3