Pre_GI: BLASTP Hits

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Query: NC_004129:926479:938775 Pseudomonas fluorescens Pf-5, complete genome

Start: 938775, End: 939062, Length: 288

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:908904:970816970816971106291Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein4e-38156
NC_012660:5793200:579792557979255798203279Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein8e-22102
NC_020209:3874844:387996038799603880241282Pseudomonas poae RE*1-1-14, complete genomehypothetical protein3e-21100
NC_007492:857428:879316879316879594279Pseudomonas fluorescens PfO-1, complete genomehypothetical protein3e-1063.5
NC_007005:4992730:499942949994294999713285Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein4e-1063.5
NC_005773:4797242:480394348039434804227285Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein4e-0960.1
NC_010322:5293652:529800352980035298293291Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein3e-0753.9
NC_008027:775896:791852791852792130279Pseudomonas entomophila L48, complete genomehypothetical protein3e-0753.9