Pre_GI: BLASTP Hits

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Query: NC_004129:5204500:5221841 Pseudomonas fluorescens Pf-5, complete genome

Start: 5221841, End: 5223187, Length: 1347

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009092:2589000:2597707259770725990441338Shewanella loihica PV-4, complete genomeSuccinylarginine dihydrolase2e-165582
NC_020064:2779864:2795092279509227964321341Serratia marcescens FGI94, complete genomesuccinylarginine dihydrolase2e-154545
NC_007963:3113739:3132885313288531342281344Chromohalobacter salexigens DSM 3043, complete genomeSuccinylarginine dihydrolase3e-153541
NC_015663:4347187:4365673436567343670131341Enterobacter aerogenes KCTC 2190 chromosome, complete genomesuccinylarginine dihydrolase8e-153540