Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:4333302:4341838 Pseudomonas fluorescens Pf-5, complete genome

Start: 4341838, End: 4342413, Length: 576

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014931:2929695:2949697294969729525102814Variovorax paradoxus EPS chromosome, complete genomephage-like protein1e-27122
NC_014931:2949697:2949697294969729525102814Variovorax paradoxus EPS chromosome, complete genomephage-like protein1e-27122
NC_011601:2806392:2824180282418028266902511Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein3e-25114
NC_013892:671000:690482690482690883402Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-25114
NC_013892:2005480:200881320088132009214402Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-24111
NC_011741:2715246:2733928273392827359342007Escherichia coli IAI1 chromosome, complete genomehypothetical protein8e-22103
CU928160:2715246:2733928273392827359342007Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein from bacteriophage origin8e-22103
NC_002937:1578213:158147915814791581886408Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein1e-2099.8
NC_007712:1997010:1997010199701019995412532Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-2099.4
NC_011769:2016000:203904220390422039449408Desulfovibrio vulgaris str. 'Miyazaki F', complete genomehypothetical protein2e-2098.6
NC_007626:418067:423624423624424067444Magnetospirillum magneticum AMB-1, complete genomehypothetical protein2e-1995.5
NC_002937:1764117:180025918002591800675417Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein4e-1994.4
NC_012962:4942000:495029849502984950693396Photorhabdus asymbiotica, complete genomesimilarities with phage structural protein p51e-1686.3
NC_014228:3022903:304154130415413041936396Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-1478.6
NC_012751:899394:9077959077959096841890Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completehypothetical protein2e-0962.4
NC_011205:1107998:1108709110870911107632055Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-0858.5
NC_010102:931055:9310559310559331092055Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0858.5
NC_009436:1141376:1143916114391611457361821Enterobacter sp. 638, complete genomehypothetical protein2e-0755.8