Pre_GI: BLASTP Hits

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Query: NC_004129:1014986:1026301 Pseudomonas fluorescens Pf-5, complete genome

Start: 1026301, End: 1027017, Length: 717

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007951:925442:927575927575928306732Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein2e-30132
NC_015136:813701:835121835121835852732Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein2e-29129
NC_008781:2655071:268244126824412683166726Polaromonas naphthalenivorans CJ2, complete genomeprotein of unknown function DUF5416e-1890.9
NC_017516:1408000:142895114289511429655705Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein2e-1789.7
NC_017501:1493292:151334215133421514046705Neisseria meningitidis 8013, complete genomehypothetical protein4e-1685.1
NC_017515:1402218:142069914206991421403705Neisseria meningitidis M04-240196 chromosome, complete genomehypothetical protein4e-1685.1
NC_010939:1633000:163415116341511634867717Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein1e-1273.6
NC_009053:1668500:167194716719471672663717Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein2e-1272.8
NC_010278:1625695:162912116291211629837717Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,periplasmic/secreted protein2e-1272.8