Pre_GI: BLASTP Hits

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Query: NC_004061:498483:514996 Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome

Start: 514996, End: 515322, Length: 327

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is the symbiont of the aphid Schizaphis graminum and contains a large circular chromosome. Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017259:480656:492747492747493088342Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,cytochrome O ubiquinol oxidase subunit IV4e-1166.6
NC_010943:1379707:139737813973781397719342Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane quinol oxidase subunit 46e-0959.3
NC_015497:3614817:362285636228563623173318Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecytochrome o ubiquinol oxidase subunit IV9e-0855.8
NC_007508:1446526:146796114679611468296336Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecytochrome O ubiquinol oxidase subunit IV1e-0755.1
NC_017253:509494:514773514773515090318Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,cytochrome O ubiquinol oxidase subunit IV5e-0753.1
NC_002528:505951:513872513872514189318Buchnera aphidicola str. APS (Acyrthosiphon pisum), completecytochrome O ubiquinol oxidase subunit IV5e-0753.1
NC_009654:91096:103477103477103800324Marinomonas sp. MWYL1, complete genomecytochrome o ubiquinol oxidase subunit IV5e-0753.1
NC_004129:5781413:579222157922215792550330Pseudomonas fluorescens Pf-5, complete genomecytochrome o ubiquinol oxidase, subunit IV3e-0650.8
NC_015723:1047418:105118610511861051611426Cupriavidus necator N-1 chromosome 2, complete sequencecytochrome o ubiquinol oxidase protein CyoD3e-0650.4