Pre_GI: BLASTP Hits

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Query: NC_003888:7659639:7696262 Streptomyces coelicolor A3(2), complete genome

Start: 7696262, End: 7699360, Length: 3099

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:2952338:2952338295233829551452808Streptomyces cattleya NRRL 8057, complete genomehypothetical protein3e-172606
NC_013929:3600343:3631218363121836343463129Streptomyces scabiei 87.22 chromosome, complete genomelantibiotic dehydratase2e-168593
NC_016111:639819:6367606367606398223063Streptomyces cattleya NRRL 8057, complete genomeLantibiotic dehydratase-like2e-140501
NC_016111:613729:6367606367606398223063Streptomyces cattleya NRRL 8057, complete genomeLantibiotic dehydratase-like2e-140501
NC_018524:2246225:2261056226105622639292874Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomethiopeptide-type bacteriocin biosynthesis domain protein1e-135484
NC_010572:4505428:4507619450761945106843066Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative lantibiotic dehydratase3e-134480
NC_014391:4644500:4660114466011446631343021Micromonospora aurantiaca ATCC 27029 chromosome, complete genomelantibiotic dehydratase domain-containing protein4e-126452
NC_014666:8488567:8488567848856784916293063Frankia sp. EuI1c chromosome, complete genomeLantibiotic dehydratase domain protein3e-120433
NC_008278:2933690:2950457295045729532042748Frankia alni ACN14a, complete genomehypothetical protein; putative lantibiotic dehydratase domain5e-115416
NC_008278:6885254:6900335690033569034633129Frankia alni ACN14a, complete genomehypothetical protein2e-112407
NC_009921:8215996:8215996821599682187432748Frankia sp. EAN1pec, complete genomeLantibiotic dehydratase domain protein5e-111403
NC_009921:51034:6942469424725313108Frankia sp. EAN1pec, complete genomeLantibiotic dehydratase domain protein6e-109395
NC_009328:293000:2997682997683029083141Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeSpaB1e-52209
NC_016593:353505:3644453644453675853141Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein3e-52207
NC_018524:4599809:4603590460359046054551866Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomelantibiotic dehydratase domain protein3e-48194
NC_014976:2420000:2430037243003724331473111Bacillus subtilis BSn5 chromosome, complete genomelanthionine synthetase B-like protein2e-47191
NC_016047:3406488:3417937341793734210293093Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeputative subtilin biosynthesis protein SpaB7e-44179
NC_014479:3245126:3260180326018032632723093Bacillus subtilis subsp. spizizenii str. W23 chromosome, completesubtilin biosynthesis protein SpaB2e-43178
NC_011567:2405000:2411068241106824141483081Anoxybacillus flavithermus WK1, complete genomeLantibiotic dehydratase6e-43176
NC_013947:3785332:3827197382719738300912895Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeLantibiotic dehydratase domain-containing protein2e-34148
NC_006510:310212:3248243248243269772154Geobacillus kaustophilus HTA426, complete genomelantibiotic biosynthesis protein5e-33144
NC_008021:879508:8889678889678919332967Streptococcus pyogenes MGAS9429, complete genomeserine/threonine dehydratase3e-32141
NC_013947:5747385:5748756574875657516622907Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeLantibiotic dehydratase domain-containing protein5e-32140
NC_013730:1074393:1076346107634610794563111Spirosoma linguale DSM 74, complete genomeLantibiotic dehydratase domain protein4e-22107
NC_017030:6558624:6576995657699565802283234Corallococcus coralloides DSM 2259 chromosome, complete genomelanthionine biosynthesis protein LanB1e-1792.8
NC_013730:2558999:2584570258457025876113042Spirosoma linguale DSM 74, complete genomeLantibiotic dehydratase domain protein4e-1687.8
NC_018524:4599809:460555246055524606523972Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomethiopeptide-type bacteriocin biosynthesis domain protein6e-1687
NC_009142:5519208:553629755362975536950654Saccharopolyspora erythraea NRRL 2338, complete genomelantibiotic dehydratase-like1e-0759.3