Pre_GI: BLASTP Hits

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Query: NC_003228:793846:809965 Bacteroides fragilis NCTC 9343, complete genome

Start: 809965, End: 810840, Length: 876

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016776:844641:860760860760861635876Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein9e-173605
NC_006347:854301:873322873322874197876Bacteroides fragilis YCH46, complete genomehypothetical protein3e-172603
NC_009614:3081190:309934830993483100256909Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein1e-48193
NC_009615:919495:925663925663926541879Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscriptional regulator3e-38159
NC_003228:3934770:394874239487423949587846Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family regulatory protein5e-29128
NC_016776:3973428:398739639873963988241846Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein5e-29128
NC_004663:2437760:247120524712052472053849Bacteroides thetaiotaomicron VPI-5482, complete genometranscriptional regulator2e-28126
NC_015164:1952500:195627119562711957128858Bacteroides salanitronis DSM 18170 chromosome, complete genometranscriptional regulator, AraC family1e-24114
NC_006347:4031000:404498540449854045563579Bacteroides fragilis YCH46, complete genometranscriptional regulator7e-24111
NC_014364:3633291:363889336388933639771879Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, AraC family4e-23108
NC_014933:979063:983963983963984871909Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family3e-22105
NC_003228:3085793:308968830896883090575888Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family transcriptional regulator3e-21102
NC_004663:2246756:224892422489242249814891Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator7e-2097.8
NC_013730:4502965:452139745213974522266870Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family5e-1995.1
NC_003228:2437288:244229724422972443136840Bacteroides fragilis NCTC 9343, complete genomeputative AraC-type transcriptional regulator6e-1994.7
NC_006347:2375480:238632923863292387168840Bacteroides fragilis YCH46, complete genomeAraC-type transcription regulator6e-1994.7
NC_016776:2516149:252699725269972527836840Bacteroides fragilis 638R, complete genomeputative AraC-type transcriptional regulator6e-1994.7
NC_004663:3680974:369676236967623697673912Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator3e-1789.4
NC_004663:1365429:137704613770461377882837Bacteroides thetaiotaomicron VPI-5482, complete genomeAraC-type transcription regulator1e-1687
NC_019960:306254:333554333554334501948Prevotella dentalis DSM 3688 chromosome 1, complete sequenceDNA-binding domain-containing protein, AraC-type1e-1584.3
NC_015947:1937341:195358619535861954440855Burkholderia sp. JV3 chromosome, complete genomeAraC family transcriptional regulator4e-1582.4
NC_014933:3856561:387760838776083878456849Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family1e-1480.5
NC_004129:926479:934135934135934989855Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family7e-1478.2
NC_009441:5248791:526511952651195265988870Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1273.6
NC_014655:2366201:237290323729032373763861Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, arac family2e-1273.2
NC_009441:4218434:423875042387504239445696Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1170.5
NC_014933:3791840:381156138115613812442882Bacteroides helcogenes P 36-108 chromosome, complete genomehelix-turn-helix- domain containing protein AraC type2e-1170.1
NC_009901:3317068:332237033223703323242873Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, AraC family3e-1169.3
NC_016114:7282882:730901673090167309861846Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeAraC family transcriptional regulator6e-1168.2
NC_013132:705314:708270708270709112843Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family1e-1067
NC_009441:3562125:357912935791293579977849Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1066.2
NC_004547:1873390:188300518830051883862858Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator8e-1064.7
NC_015690:1818333:1872120187212018737301611Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYbbB1e-0963.5
NC_016935:2347691:2401895240189524035051611Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-0963.5
NC_016935:2302055:232616123261612327048888Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-0860.5
NC_013132:153163:156153156153157094942Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family1e-0860.5
NC_017986:5605197:563115756311575632029873Pseudomonas putida ND6 chromosome, complete genomeHelix-turn-helix domain-containing protein4e-0858.9
NC_015690:1772015:179601417960141796901888Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator4e-0858.9
NC_016609:4233701:424485042448504245719870Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator4e-0858.9
NC_013730:778076:782821782821783741921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family7e-0858.2
NC_019960:1658657:173379017337901734695906Prevotella dentalis DSM 3688 chromosome 1, complete sequenceDNA-binding domain-containing protein, AraC-type1e-0757.4
NC_015732:30472:3390633906353961491Spirochaeta caldaria DSM 7334 chromosome, complete genometwo component AraC family transcriptional regulator1e-0757
NC_003228:2473956:247395624739562474882927Bacteroides fragilis NCTC 9343, complete genomeputative AraC family transcriptional regulator2e-0756.6
NC_013730:4502965:452028045202804521137858Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family3e-0756.2
NC_014624:2668157:271610827161082716983876Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator5e-0755.5
NC_013730:4811911:482916548291654830043879Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family6e-0755.1
NC_013132:1652477:165247716524771653346870Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family7e-0754.7
NC_014624:1840209:1866679186667918680071329Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator8e-0754.7
NC_013132:3081806:308538930853893086222834Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family1e-0653.9
NC_020054:3132478:313830531383053139264960Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family2e-0653.1
NC_016935:2503071:2534077253407725364132337Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_015690:1967244:2001127200112720035262400Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_013132:7204082:722428772242877225204918Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family4e-0652.4
NC_013406:1217385:1220860122086012224821623Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator7e-0651.6
NC_014720:154111:1778311778311802002370Caldicellulosiruptor kronotskyensis 2002 chromosome, completetranscriptional regulator, arac family7e-0651.6
NC_015164:1952500:197383319738331974720888Bacteroides salanitronis DSM 18170 chromosome, complete genometranscriptional regulator, AraC family8e-0651.2