Pre_GI: BLASTP Hits

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Query: NC_003198:4397074:4414008 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4414008, End: 4414313, Length: 306

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:4381724:439865843986584398963306Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-53206
NC_016832:4368948:438592743859274386187261Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-44177
NC_012125:4481808:450130445013044501450147Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-21101