Pre_GI: BLASTP Hits

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Query: NC_003198:1908238:1931753 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1931753, End: 1931947, Length: 195

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:2580774:260334526033452603578234Escherichia coli KO11FL chromosome, complete genomerestriction alleviation protein, Lar family5e-30129
CP002516:2580774:260334526033452603578234Escherichia coli KO11, complete genomerestriction alleviation protein, Lar family5e-30129
NC_012967:1403733:141090314109031411097195Escherichia coli B str. REL606 chromosome, complete genomerestriction alleviation and modification protein1e-29128
NC_012759:1296000:130381613038161304010195Escherichia coli BW2952 chromosome, complete genomerestriction alleviation and modification protein1e-29128
NC_010473:1493983:150115315011531501347195Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; restriction alleviation protein1e-29128
NC_000913:1404000:141175714117571411951195Escherichia coli K12, complete genomeRac prophage; restriction alleviation protein1e-29128
AC_000091:1407693:141544714154471415641195Escherichia coli W3110 DNA, complete genomerestriction alleviation protein1e-29128